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Os01g0153800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
Description : Esterase/lipase/thioesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
186.77 | 0.642 | 2.99 | -0.136 | 0.109 | 3.99 | -0.265 | -9.81 | 0.1 | 23 | 50.08 | 77 | -- | -- |
190.55 | 0.643 | 2.95 | -0.0312 | 0.125 | 0.646 | -0.176 | -- | 0.0899 | 21.1 | 52.48 | 114 | -- | -- |
187.01 | 0.637 | 2.99 | -0.12 | 0.11 | 4.21 | -- | -10.2 | 0.101 | 22.5 | 49.88 | 77 | -- | -- |
190.4 | 0.643 | 2.95 | 0.0128 | 0.13 | 0.53 | -- | -- | 0.107 | 21.8 | 53.86 | 90 | -- | -- |
187.48 | 0.638 | 3 | -0.16 | -- | 5.68 | -- | -14.1 | 0.0852 | -- | 49.26 | 78 | -- | -- |
192.45 | 0.65 | 2.96 | 0.0301 | 0.134 | -- | -0.235 | -- | 0.0828 | 21.5 | -- | -- | -- | -- |
192.63 | 0.65 | 2.96 | 0.0396 | 0.138 | -- | -- | -- | 0.0837 | 21 | -- | -- | -- | -- |
191.43 | 0.644 | 2.95 | -0.000759 | -- | 0.571 | -- | -- | 0.0985 | -- | 54 | 90 | -- | -- |
190.36 | 0.643 | 2.95 | -- | 0.131 | 0.577 | -- | -- | 0.104 | 22 | 53.95 | 90 | -- | -- |
193.73 | 0.65 | 2.95 | 0.0397 | -- | -- | -- | -- | 0.0828 | -- | -- | -- | -- | -- |
192.67 | 0.649 | 2.96 | -- | 0.138 | -- | -- | -- | 0.0793 | 21 | -- | -- | -- | -- |
191.43 | 0.644 | 2.95 | -- | -- | 0.572 | -- | -- | 0.0989 | -- | 54 | 90 | -- | -- |
193.77 | 0.65 | 2.95 | -- | -- | -- | -- | -- | 0.0784 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance![]() |
Histogram![]() ![]() |
Local optima within top1000 grid-points
rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|
1 | 175.60 | humidity | 50.0 | 30 | < th | dose dependent | rect. | 17 | 19 |
3 | 175.72 | humidity | 50.0 | 30 | < th | dose independent | rect. | 17 | 19 |
9 | 176.70 | humidity | 50.0 | 30 | < th | dose dependent | rect. | 17 | 1 |
27 | 176.75 | humidity | 50.0 | 30 | < th | dose independent | rect. | 17 | 1 |
45 | 176.90 | radiation | 10.0 | 30 | > th | dose independent | rect. | 17 | 1 |
58 | 177.64 | radiation | 10.0 | 30 | > th | dose dependent | rect. | 17 | 1 |
87 | 182.73 | humidity | 50.0 | 30 | < th | dose independent | sin | 8 | NA |
103 | 182.81 | radiation | 20.0 | 90 | > th | dose dependent | rect. | 16 | 15 |
136 | 184.01 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
139 | 184.01 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
143 | 184.01 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
153 | 184.01 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
154 | 184.01 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
174 | 184.01 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
177 | 184.01 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
182 | 184.05 | humidity | 90.0 | 30 | < th | dose independent | rect. | 24 | 1 |
184 | 184.15 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 1 |
185 | 184.24 | temperature | 30.0 | 30 | > th | dose dependent | rect. | 17 | 1 |
187 | 184.32 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
188 | 184.33 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
189 | 184.35 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 24 | 1 |
194 | 184.53 | wind | 1.0 | 30 | > th | dose independent | rect. | 24 | 1 |
196 | 184.55 | humidity | 80.0 | 30 | > th | dose independent | rect. | 24 | 1 |
197 | 184.55 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
198 | 184.56 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 1 |
200 | 184.59 | wind | 5.0 | 30 | < th | dose independent | rect. | 24 | 1 |
203 | 184.59 | temperature | 10.0 | 30 | > th | dose independent | rect. | 24 | 1 |
204 | 184.59 | temperature | 30.0 | 30 | < th | dose independent | rect. | 24 | 1 |
205 | 184.59 | humidity | 50.0 | 30 | > th | dose independent | rect. | 24 | 1 |
209 | 184.59 | radiation | 1.0 | 30 | < th | dose independent | rect. | 24 | 1 |
214 | 184.59 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 24 | 1 |
215 | 184.59 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 23 |
216 | 184.59 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
221 | 184.59 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 24 | 1 |
222 | 184.63 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 24 | 1 |
227 | 184.73 | wind | 9.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
232 | 184.82 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
236 | 185.12 | wind | 1.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
239 | 185.27 | humidity | 50.0 | 30 | > th | dose independent | sin | 10 | NA |
244 | 185.38 | humidity | 50.0 | 30 | < th | dose dependent | sin | 9 | NA |
245 | 185.39 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
290 | 185.89 | wind | 9.0 | 30 | < th | dose independent | rect. | 1 | 23 |
292 | 185.94 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
338 | 186.01 | wind | 1.0 | 1440 | < th | dose independent | rect. | 24 | 1 |
386 | 186.53 | wind | 7.0 | 720 | > th | dose independent | rect. | 15 | 1 |
389 | 186.57 | temperature | 30.0 | 90 | > th | dose independent | rect. | 16 | 1 |
393 | 186.68 | wind | 9.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
394 | 186.68 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
397 | 186.74 | wind | 1.0 | 1440 | > th | dose independent | rect. | 24 | 1 |
424 | 186.92 | humidity | 50.0 | 90 | < th | dose dependent | sin | 17 | NA |
435 | 186.94 | humidity | 50.0 | 90 | < th | dose dependent | no | NA | NA |
747 | 187.16 | temperature | 30.0 | 10 | > th | dose independent | rect. | 17 | 1 |
748 | 187.17 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
752 | 187.17 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
758 | 187.17 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
761 | 187.17 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 6 |
766 | 187.24 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 10 |
772 | 187.30 | humidity | 50.0 | 90 | > th | dose independent | rect. | 12 | 11 |
811 | 187.42 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
834 | 187.53 | humidity | 50.0 | 30 | > th | dose independent | rect. | 21 | 23 |
837 | 187.54 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 1 |
845 | 187.58 | humidity | 50.0 | 90 | < th | dose independent | no | NA | NA |
846 | 187.58 | humidity | 50.0 | 90 | < th | dose independent | rect. | 11 | 7 |