Os01g0153700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0153700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.21 | 0.391 | 8.32 | 0.443 | 0.385 | 0.974 | 0.057 | 0.17 | -0.173 | 8.82 | 10.39 | 3789 | -- | -- |
| 69.23 | 0.388 | 8.33 | 0.408 | 0.388 | 0.968 | 0.0496 | -- | -0.18 | 8.8 | 10.4 | 3767 | -- | -- |
| 69.22 | 0.387 | 8.32 | 0.443 | 0.386 | 0.975 | -- | 0.161 | -0.174 | 8.77 | 10.24 | 3767 | -- | -- |
| 69.24 | 0.388 | 8.33 | 0.407 | 0.386 | 0.969 | -- | -- | -0.183 | 8.76 | 9.828 | 3767 | -- | -- |
| 75.91 | 0.406 | 8.33 | 0.443 | -- | 0.949 | -- | 0.229 | -0.164 | -- | 10.07 | 4362 | -- | -- |
| 85.42 | 0.433 | 8.29 | 0.825 | 0.345 | -- | -0.0793 | -- | 0.00291 | 8 | -- | -- | -- | -- |
| 85.43 | 0.433 | 8.29 | 0.823 | 0.344 | -- | -- | -- | 0.00311 | 8.06 | -- | -- | -- | -- |
| 75.96 | 0.406 | 8.34 | 0.391 | -- | 0.938 | -- | -- | -0.178 | -- | 9.47 | 4359 | -- | -- |
| 72.27 | 0.396 | 8.34 | -- | 0.383 | 1.18 | -- | -- | -0.26 | 8.58 | 10.02 | 5207 | -- | -- |
| 91.93 | 0.448 | 8.29 | 0.827 | -- | -- | -- | -- | 0.00738 | -- | -- | -- | -- | -- |
| 103.31 | 0.475 | 8.31 | -- | 0.35 | -- | -- | -- | -0.0886 | 7.89 | -- | -- | -- | -- |
| 78.66 | 0.413 | 8.36 | -- | -- | 1.17 | -- | -- | -0.277 | -- | 9.806 | 5797 | -- | -- |
| 109.96 | 0.489 | 8.31 | -- | -- | -- | -- | -- | -0.0843 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.22 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 2 | 66.38 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 4 | 67.01 | radiation | 40 | 4320 | < th | dose dependent | rect. | 2 | 4 |
| 7 | 67.18 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 14 | 67.27 | radiation | 40 | 4320 | < th | dose dependent | rect. | 19 | 11 |
| 15 | 67.29 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 18 | 67.31 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 3 |
| 19 | 67.31 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 9 |
| 25 | 67.33 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 29 | 67.40 | radiation | 40 | 4320 | < th | dose dependent | rect. | 23 | 7 |
| 36 | 67.54 | radiation | 1 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 57 | 67.65 | radiation | 20 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 69 | 67.79 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 87 | 68.21 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 90 | 68.22 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 7 |
| 94 | 68.25 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 11 |
| 100 | 68.33 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 119 | 68.46 | radiation | 30 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 138 | 68.51 | radiation | 40 | 4320 | < th | dose dependent | rect. | 16 | 15 |
| 144 | 68.66 | radiation | 10 | 4320 | > th | dose independent | rect. | 16 | 15 |
| 145 | 68.67 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 2 |
| 193 | 68.86 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 14 |
| 196 | 68.89 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 200 | 68.90 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 208 | 68.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 219 | 68.96 | humidity | 60 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 221 | 68.97 | temperature | 10 | 4320 | > th | dose dependent | sin | 6 | NA |
| 222 | 68.97 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 9 |
| 233 | 69.00 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 249 | 69.04 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 251 | 69.04 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 4 |
| 261 | 69.05 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 12 |
| 266 | 69.06 | temperature | 30 | 4320 | < th | dose dependent | rect. | 5 | 4 |
| 276 | 69.08 | radiation | 10 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 284 | 69.09 | radiation | 10 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 286 | 69.09 | radiation | 10 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 288 | 69.09 | humidity | 70 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 309 | 69.12 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 311 | 69.12 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 7 |
| 317 | 69.13 | humidity | 60 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 356 | 69.17 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 368 | 69.18 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 458 | 69.24 | humidity | 70 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 479 | 69.26 | temperature | 30 | 4320 | < th | dose dependent | sin | 7 | NA |
| 606 | 69.37 | temperature | 10 | 4320 | > th | dose dependent | no | NA | NA |
| 612 | 69.37 | temperature | 10 | 4320 | > th | dose dependent | rect. | 14 | 23 |
| 625 | 69.38 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 626 | 69.38 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 23 |
| 658 | 69.40 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 23 |
| 678 | 69.42 | wind | 7 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 702 | 69.44 | humidity | 60 | 43200 | > th | dose independent | rect. | 14 | 10 |
| 743 | 69.47 | humidity | 60 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 878 | 69.55 | radiation | 20 | 4320 | < th | dose independent | sin | 12 | NA |
| 992 | 69.60 | humidity | 60 | 43200 | > th | dose independent | sin | 15 | NA |