Os01g0153200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein S8 family protein.
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Os01g0153200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein S8 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 176.61 | 0.619 | 2.9 | 0.0329 | 0.0896 | -0.132 | 0.421 | 5.24 | 0.0543 | 12.2 | 46.64 | 6 | -- | -- |
| 176.61 | 0.624 | 2.91 | -0.0011 | 0.0897 | 1.89 | 0.422 | -- | 0.0541 | 12.2 | 40.71 | 183 | -- | -- |
| 177.25 | 0.62 | 2.9 | 0.0402 | 0.0985 | 0.399 | -- | 4.07 | 0.0573 | 14.1 | 46.93 | 5 | -- | -- |
| 177.25 | 0.624 | 2.91 | 0.0134 | 0.0986 | 1.96 | -- | -- | 0.0574 | 14.1 | 40.73 | 580 | -- | -- |
| 177.83 | 0.621 | 2.9 | 0.035 | -- | 0.379 | -- | 4.24 | 0.0552 | -- | 46.61 | 5 | -- | -- |
| 186.67 | 0.641 | 2.91 | 0.0681 | 0.135 | -- | 0.659 | -- | 0.0464 | 12.2 | -- | -- | -- | -- |
| 188.43 | 0.643 | 2.91 | 0.0953 | 0.141 | -- | -- | -- | 0.0505 | 13.5 | -- | -- | -- | -- |
| 177.83 | 0.624 | 2.91 | 0.00749 | -- | 2.01 | -- | -- | 0.0552 | -- | 46.61 | 5 | -- | -- |
| 177.25 | 0.623 | 2.91 | -- | 0.0982 | 1.97 | -- | -- | 0.0559 | 14.1 | 40.69 | 336 | -- | -- |
| 189.65 | 0.643 | 2.91 | 0.0897 | -- | -- | -- | -- | 0.0475 | -- | -- | -- | -- | -- |
| 188.67 | 0.643 | 2.91 | -- | 0.139 | -- | -- | -- | 0.0399 | 13.5 | -- | -- | -- | -- |
| 177.83 | 0.623 | 2.91 | -- | -- | 2.01 | -- | -- | 0.0544 | -- | 46.61 | 5 | -- | -- |
| 189.86 | 0.643 | 2.91 | -- | -- | -- | -- | -- | 0.0375 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.70 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 2 | 169.93 | radiation | 40 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 20 | 170.75 | wind | 1 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 21 | 171.60 | radiation | 30 | 90 | > th | dose independent | rect. | 15 | 1 |
| 37 | 171.61 | humidity | 60 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 39 | 171.75 | humidity | 60 | 10 | < th | dose independent | rect. | 15 | 1 |
| 73 | 171.84 | radiation | 20 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 89 | 171.87 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 1 |
| 321 | 172.89 | humidity | 60 | 10 | < th | dose dependent | rect. | 14 | 5 |
| 339 | 172.98 | wind | 1 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 342 | 173.06 | humidity | 60 | 10 | < th | dose independent | rect. | 14 | 5 |
| 444 | 173.61 | humidity | 70 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 446 | 173.68 | humidity | 50 | 30 | > th | dose independent | rect. | 13 | 23 |
| 451 | 173.94 | humidity | 50 | 30 | < th | dose independent | sin | 7 | NA |
| 453 | 174.00 | radiation | 30 | 10 | < th | dose independent | sin | 14 | NA |
| 454 | 174.00 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 485 | 174.21 | wind | 1 | 90 | < th | dose independent | rect. | 15 | 1 |
| 507 | 174.41 | humidity | 60 | 10 | < th | dose dependent | sin | 12 | NA |
| 509 | 174.42 | humidity | 60 | 10 | < th | dose independent | sin | 12 | NA |
| 514 | 174.46 | wind | 1 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 531 | 174.49 | humidity | 60 | 90 | < th | dose independent | sin | 13 | NA |
| 533 | 174.53 | humidity | 60 | 10 | > th | dose independent | sin | 12 | NA |
| 553 | 174.69 | wind | 3 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 573 | 174.76 | humidity | 60 | 90 | > th | dose independent | sin | 13 | NA |
| 574 | 174.81 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 8 | 2 |
| 576 | 174.82 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 8 | 1 |
| 607 | 174.93 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 6 | 5 |
| 608 | 174.94 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 6 | 1 |
| 618 | 174.97 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 12 | 1 |
| 653 | 175.09 | humidity | 50 | 30 | < th | dose dependent | rect. | 11 | 5 |
| 672 | 175.11 | temperature | 15 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 717 | 175.23 | humidity | 50 | 30 | < th | dose dependent | sin | 6 | NA |
| 735 | 175.32 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 2 | 9 |
| 753 | 175.36 | wind | 3 | 10 | < th | dose independent | rect. | 16 | 1 |
| 768 | 175.45 | radiation | 1 | 10 | > th | dose dependent | sin | 14 | NA |
| 773 | 175.48 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 794 | 175.63 | radiation | 30 | 10 | < th | dose dependent | sin | 14 | NA |
| 796 | 175.64 | temperature | 15 | 30 | > th | dose independent | rect. | 13 | 23 |
| 838 | 175.75 | radiation | 20 | 30 | > th | dose independent | sin | 14 | NA |
| 885 | 175.96 | atmosphere | 1000 | 30 | < th | dose dependent | rect. | 6 | 5 |
| 893 | 176.01 | humidity | 50 | 30 | < th | dose independent | rect. | 17 | 20 |
| 897 | 176.04 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 922 | 176.16 | humidity | 50 | 30 | < th | dose dependent | rect. | 17 | 20 |
| 934 | 176.28 | radiation | 20 | 30 | > th | dose independent | rect. | 12 | 5 |
| 956 | 176.32 | humidity | 50 | 10 | < th | dose independent | rect. | 11 | 1 |