Os01g0151200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Inner membrane protein ALBINO3, chloroplast precursor. Splice isoform 2.
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Os01g0151200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Inner membrane protein ALBINO3, chloroplast precursor. Splice isoform 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.04 | 0.244 | 13.8 | 0.0251 | 0.39 | 0.823 | 0.191 | 0.23 | -0.203 | 15.4 | 24.2 | 1281 | -- | -- |
| 27.1 | 0.242 | 13.8 | 0.0606 | 0.38 | 0.815 | 0.193 | -- | -0.199 | 15.3 | 24.1 | 1274 | -- | -- |
| 27.12 | 0.243 | 13.8 | 0.0174 | 0.387 | 0.839 | -- | 0.296 | -0.208 | 15.5 | 24 | 1236 | -- | -- |
| 27.23 | 0.243 | 13.8 | 0.0632 | 0.391 | 0.797 | -- | -- | -0.193 | 15.4 | 24.17 | 1274 | -- | -- |
| 35.08 | 0.276 | 13.8 | 0.103 | -- | 0.81 | -- | -0.215 | -0.207 | -- | 56.44 | 1166 | -- | -- |
| 35.32 | 0.279 | 13.9 | -0.172 | 0.433 | -- | 0.179 | -- | -0.352 | 15.2 | -- | -- | -- | -- |
| 35.42 | 0.279 | 13.9 | -0.168 | 0.435 | -- | -- | -- | -0.351 | 15.3 | -- | -- | -- | -- |
| 35.12 | 0.276 | 13.8 | 0.0568 | -- | 0.808 | -- | -- | -0.219 | -- | 37.98 | 1163 | -- | -- |
| 27.32 | 0.243 | 13.8 | -- | 0.391 | 0.762 | -- | -- | -0.208 | 15.5 | 24.14 | 1233 | -- | -- |
| 46.12 | 0.317 | 13.9 | -0.187 | -- | -- | -- | -- | -0.362 | -- | -- | -- | -- | -- |
| 36.17 | 0.281 | 13.9 | -- | 0.438 | -- | -- | -- | -0.332 | 15.3 | -- | -- | -- | -- |
| 35.13 | 0.276 | 13.8 | -- | -- | 0.791 | -- | -- | -0.217 | -- | 32.1 | 1163 | -- | -- |
| 47.03 | 0.32 | 13.9 | -- | -- | -- | -- | -- | -0.342 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.83 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 13 | 25.48 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 27 | 26.00 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 18 |
| 37 | 26.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 38 | 26.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 39 | 26.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 48 | 26.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 60 | 26.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 68 | 26.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 73 | 26.34 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 83 | 26.36 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 5 |
| 133 | 26.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 11 |
| 172 | 26.47 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 6 |
| 210 | 26.50 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 446 | 26.72 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 561 | 26.86 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 632 | 26.93 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 19 |
| 668 | 26.97 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 676 | 26.98 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 682 | 26.98 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 683 | 26.98 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 10 |
| 718 | 27.02 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 18 |
| 861 | 27.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 879 | 27.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 994 | 27.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |