Os01g0149900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0149900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.24 | 0.468 | 9.64 | 1.01 | 1.55 | 0.834 | -0.336 | -2.57 | 0.179 | 7.73 | 24.4 | 10 | -- | -- |
| 102.29 | 0.475 | 9.6 | 1.34 | 1.55 | 0.609 | -0.381 | -- | 0.277 | 7.85 | 24.4 | 10 | -- | -- |
| 99.24 | 0.468 | 9.64 | 1 | 1.55 | 0.858 | -- | -2.62 | 0.178 | 7.72 | 24.4 | 10 | -- | -- |
| 102.71 | 0.475 | 9.6 | 1.33 | 1.55 | 0.623 | -- | -- | 0.276 | 7.83 | 24.4 | 10 | -- | -- |
| 225.08 | 0.703 | 9.68 | 1.02 | -- | 0.674 | -- | -2.24 | 0.191 | -- | 14.4 | 8 | -- | -- |
| 108.01 | 0.487 | 9.59 | 1.44 | 1.5 | -- | -0.439 | -- | 0.343 | 8.43 | -- | -- | -- | -- |
| 108.62 | 0.488 | 9.59 | 1.43 | 1.5 | -- | -- | -- | 0.343 | 8.44 | -- | -- | -- | -- |
| 229.23 | 0.708 | 9.64 | 1.32 | -- | 0.629 | -- | -- | 0.275 | -- | 14.4 | 8 | -- | -- |
| 147.37 | 0.565 | 9.65 | -- | 1.59 | 0.952 | -- | -- | 0.0624 | 7.47 | 23.04 | 10 | -- | -- |
| 234.85 | 0.716 | 9.63 | 1.44 | -- | -- | -- | -- | 0.358 | -- | -- | -- | -- | -- |
| 162.46 | 0.596 | 9.62 | -- | 1.51 | -- | -- | -- | 0.184 | 8.37 | -- | -- | -- | -- |
| 272.75 | 0.769 | 9.69 | -- | -- | 1.04 | -- | -- | 0.0808 | -- | 13.34 | 2 | -- | -- |
| 289.29 | 0.794 | 9.66 | -- | -- | -- | -- | -- | 0.199 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 11 |
| 5 | 93.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 26 | 94.86 | temperature | 25 | 10 | > th | dose dependent | rect. | 10 | 6 |
| 35 | 95.11 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 41 | 95.19 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 46 | 95.31 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 13 |
| 81 | 95.88 | temperature | 25 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 125 | 96.35 | temperature | 25 | 10 | > th | dose independent | rect. | 4 | 12 |
| 135 | 96.55 | temperature | 20 | 90 | > th | dose dependent | sin | 2 | NA |
| 140 | 96.61 | temperature | 20 | 10 | > th | dose dependent | sin | 1 | NA |
| 142 | 96.63 | temperature | 25 | 10 | > th | dose independent | rect. | 2 | 14 |
| 195 | 96.94 | temperature | 20 | 270 | > th | dose dependent | sin | 4 | NA |
| 209 | 97.06 | temperature | 25 | 270 | > th | dose independent | rect. | 9 | 4 |
| 210 | 97.06 | temperature | 25 | 270 | < th | dose independent | rect. | 24 | 12 |
| 262 | 97.30 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 1 |
| 304 | 97.52 | temperature | 30 | 90 | < th | dose dependent | sin | 2 | NA |
| 374 | 97.79 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 12 |
| 385 | 97.83 | temperature | 25 | 10 | < th | dose independent | rect. | 2 | 11 |
| 419 | 97.98 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 538 | 98.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 8 | 11 |
| 601 | 98.53 | temperature | 25 | 10 | > th | dose dependent | rect. | 10 | 22 |
| 656 | 98.67 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 6 |
| 693 | 98.77 | temperature | 25 | 10 | > th | dose dependent | rect. | 10 | 12 |
| 731 | 98.86 | temperature | 25 | 270 | > th | dose independent | sin | 4 | NA |
| 733 | 98.86 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 1 |
| 751 | 98.90 | wind | 9 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 760 | 98.93 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 761 | 98.93 | temperature | 25 | 10 | < th | dose independent | rect. | 2 | 16 |
| 763 | 98.94 | wind | 9 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 795 | 98.99 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 9 |
| 802 | 99.00 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 822 | 99.04 | temperature | 25 | 10 | < th | dose independent | sin | 2 | NA |
| 824 | 99.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 826 | 99.04 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 828 | 99.05 | temperature | 25 | 270 | < th | dose independent | sin | 5 | NA |
| 833 | 99.06 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 838 | 99.07 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 845 | 99.07 | wind | 9 | 43200 | > th | dose dependent | rect. | 11 | 19 |
| 856 | 99.09 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 16 |
| 881 | 99.12 | wind | 9 | 43200 | > th | dose dependent | rect. | 13 | 11 |
| 892 | 99.14 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 11 |
| 916 | 99.16 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 934 | 99.18 | temperature | 25 | 270 | > th | dose independent | rect. | 10 | 1 |
| 937 | 99.18 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 11 |
| 950 | 99.19 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 16 |
| 989 | 99.23 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 9 |
| 992 | 99.23 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 994 | 99.23 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 21 |