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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0149700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3 (0.0321) R2 : 0.000974
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0451 (0.0676) R2dN8 : 0.00126 R2N8 : 0.000974
σ : 0.605
deviance : 167.79
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
158.08 0.591 3.06 -0.123 0.0311 10 -0.788 -32.5 -0.0246 5.51 0.2162 74 -- --
157.45 0.584 3.01 0.0775 0.215 1.84 0.0548 -- -0.0195 11.6 1.144 197 -- --
158.51 0.586 3.05 -0.149 0.142 10.7 -- -34.4 -0.0324 10.4 0.2884 76 -- --
155.4 0.581 3 0.0349 0.173 2.15 -- -- -0.0136 10.6 1.5 182 -- --
159.61 0.588 3.05 -0.13 -- 10.4 -- -33.8 -0.022 -- 0.3041 73 -- --
165.38 0.603 3 0.0869 0.0144 -- -0.948 -- -0.0401 5.45 -- -- -- --
166.56 0.604 3 0.0874 0.129 -- -- -- -0.0347 11.1 -- -- -- --
157.07 0.584 3 0.0362 -- 2.11 -- -- -0.0239 -- 1.5 179 -- --
155.36 0.581 3 -- 0.171 2.29 -- -- -0.0306 9.99 1.5 178 -- --
167.61 0.605 3 0.0844 -- -- -- -- -0.0357 -- -- -- -- --
166.76 0.604 3 -- 0.129 -- -- -- -0.0444 11 -- -- -- --
157.08 0.584 3 -- -- 2.23 -- -- -0.0252 -- 1.5 178 -- --
167.79 0.605 3 -- -- -- -- -- -0.0451 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 151.26 atmosphere 1005.0 30 > th dose independent rect. 12 1
2 151.62 radiation 40.0 30 > th dose independent rect. 12 1
5 151.79 atmosphere 1005.0 30 > th dose dependent rect. 12 1
6 151.80 wind 3.0 30 > th dose independent rect. 12 1
7 151.87 temperature 10.0 1440 > th dose independent rect. 13 1
11 151.87 atmosphere 995.0 1440 > th dose independent rect. 13 1
14 151.87 temperature 10.0 1440 > th dose independent rect. 14 23
18 151.93 radiation 30.0 30 > th dose dependent rect. 12 1
25 152.31 wind 1.0 30 > th dose dependent rect. 12 1
47 152.48 temperature 25.0 30 > th dose dependent rect. 12 1
48 152.53 precipitation 0.1 30 < th dose independent rect. 13 23
49 152.53 precipitation 0.1 30 < th dose dependent rect. 13 23
50 152.56 temperature 30.0 30 < th dose independent rect. 12 1
54 152.75 atmosphere 995.0 30 > th dose independent rect. 13 23
58 152.81 radiation 10.0 30 > th dose independent rect. 12 1
59 152.84 wind 9.0 30 < th dose independent rect. 12 1
60 152.84 temperature 10.0 30 > th dose independent rect. 12 1
62 152.84 atmosphere 995.0 30 > th dose independent rect. 12 1
63 152.84 atmosphere 1015.0 30 < th dose independent rect. 12 1
65 152.84 precipitation 0.1 30 < th dose independent rect. 12 1
66 152.84 temperature 10.0 30 > th dose independent rect. 13 23
67 152.84 precipitation 0.1 30 < th dose dependent rect. 12 1
91 152.93 humidity 90.0 30 < th dose independent rect. 12 1
92 152.94 humidity 90.0 30 < th dose dependent rect. 12 1
93 152.95 temperature 25.0 30 > th dose independent rect. 12 1
96 153.00 humidity 70.0 30 < th dose independent rect. 12 1
100 153.02 humidity 50.0 30 > th dose independent rect. 12 1
101 153.09 humidity 50.0 30 > th dose dependent rect. 12 1
108 153.31 wind 9.0 30 < th dose dependent rect. 12 1
110 153.35 wind 9.0 30 < th dose independent rect. 13 23
118 153.65 atmosphere 1015.0 30 < th dose dependent rect. 12 1
210 154.88 precipitation 0.1 270 > th dose dependent rect. 14 6
228 155.25 precipitation 0.1 270 > th dose independent rect. 15 4
231 155.28 atmosphere 1000.0 270 < th dose dependent rect. 16 1
232 155.28 precipitation 0.1 270 > th dose dependent rect. 17 2
261 155.38 atmosphere 1000.0 270 < th dose dependent rect. 16 3
262 155.39 atmosphere 1000.0 270 < th dose independent rect. 16 1
267 155.48 precipitation 0.1 270 > th dose independent rect. 16 1
284 155.60 temperature 25.0 90 < th dose dependent rect. 14 7
293 155.71 temperature 10.0 30 > th dose dependent rect. 13 23
314 156.14 precipitation 0.1 270 > th dose dependent rect. 14 14
334 156.36 radiation 40.0 10 > th dose independent sin 13 NA
346 156.51 temperature 25.0 90 < th dose dependent rect. 17 2
416 156.93 atmosphere 1000.0 720 > th dose independent rect. 5 8
433 157.07 humidity 50.0 30 > th dose independent rect. 13 23
435 157.10 precipitation 0.1 270 > th dose dependent sin 19 NA
449 157.17 radiation 40.0 10 > th dose dependent sin 13 NA
464 157.29 precipitation 0.1 10 < th dose independent sin 21 NA
466 157.29 precipitation 0.1 10 < th dose dependent sin 21 NA
487 157.44 precipitation 0.1 270 > th dose dependent rect. 2 17
497 157.47 temperature 15.0 90 > th dose dependent rect. 13 11
501 157.49 precipitation 0.1 270 > th dose dependent rect. 22 21
511 157.53 temperature 30.0 10 > th dose independent rect. 12 22
550 157.61 temperature 15.0 10 > th dose dependent rect. 14 11
554 157.62 precipitation 0.1 270 > th dose dependent rect. 14 19
565 157.66 precipitation 0.1 270 > th dose dependent rect. 8 20
575 157.71 temperature 25.0 30 > th dose independent rect. 14 19
586 157.76 radiation 1.0 720 < th dose dependent rect. 14 13
602 157.80 radiation 1.0 720 < th dose dependent rect. 17 10
613 157.83 temperature 25.0 90 > th dose independent rect. 14 21
644 157.89 temperature 20.0 10 > th dose dependent rect. 16 17
656 157.93 temperature 20.0 30 > th dose dependent rect. 14 19
669 157.97 atmosphere 1015.0 30 < th dose independent rect. 13 23
728 158.06 precipitation 0.1 10 > th dose dependent sin 22 NA
734 158.07 temperature 25.0 30 > th dose independent rect. 16 17
741 158.10 radiation 30.0 30 < th dose independent rect. 3 22
742 158.10 temperature 20.0 10 > th dose dependent rect. 16 9
747 158.12 temperature 25.0 90 > th dose independent rect. 14 11
748 158.12 temperature 20.0 90 > th dose dependent rect. 16 19
779 158.20 precipitation 0.1 10 > th dose independent sin 22 NA
835 158.35 temperature 20.0 30 > th dose dependent sin 14 NA
848 158.37 precipitation 0.1 90 > th dose dependent rect. 3 21
861 158.39 precipitation 0.1 90 > th dose dependent rect. 17 23
878 158.42 temperature 20.0 270 > th dose dependent rect. 16 17
894 158.44 precipitation 0.1 720 < th dose independent rect. 17 8
897 158.44 precipitation 0.1 720 < th dose dependent rect. 17 8
909 158.45 temperature 25.0 720 > th dose dependent rect. 13 1
917 158.46 precipitation 0.1 10 > th dose independent rect. 17 3
938 158.46 precipitation 0.1 10 > th dose dependent rect. 17 3
966 158.47 radiation 30.0 10 < th dose independent rect. 7 18
980 158.49 wind 1.0 30 > th dose independent rect. 13 23
986 158.50 wind 1.0 1440 < th dose independent rect. 20 1