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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0148200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.93 (0.0312) R2 : 0.173
β1 : 0.386 (0.115) R2dD : 0.0221 R2D : -0.00224
β2 : -- (--) R2dC : -- R2C : --
β3 : 15.8 (1.62) R2dE : 1.62 R2E : -1.3
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 68.2 (7.38) R2dD*E : 1.46 R2D*E : -1.45
γ1 : 0.0506 (0.0661) R2dN8 : 0.00118 R2N8 : -0.00522
σ : 0.578
deviance : 153.98
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_____
C
peak time of C : --
E
wheather : wind
threshold : 6.93
memory length : 72
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 21.1
open length of G : 5.44

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
153.82 0.583 2.94 0.42 0.0178 15.9 -0.348 69.7 0.043 2.37 6.999 79 21.1 7.42
184.52 0.638 2.89 0.196 0.0896 -0.157 -0.00291 -- 0.0231 0.332 6.999 79 21.1 7.42
153.97 0.578 2.93 0.397 0.0239 15.8 -- 68.3 0.05 3.62 6.921 70 21.1 5.21
173.19 0.613 2.86 0.224 0.0448 2.07 -- -- 0.156 11.3 3.21 330 20.2 5.83
153.98 0.578 2.93 0.386 -- 15.8 -- 68.2 0.0506 -- 6.93 72 21.1 5.44
184.54 0.637 2.89 0.198 0.0885 -- -5.48e-05 -- 0.0238 0.353 -- -- -- --
184.54 0.636 2.89 0.198 0.0885 -- -- -- 0.0238 0.352 -- -- -- --
173.22 0.613 2.88 0.282 -- 2.11 -- -- 0.122 -- 3.339 319 20.7 5.37
174.17 0.615 2.88 -- 0.07 1.82 -- -- 0.0712 11.9 3.046 330 20.1 5.88
185.03 0.636 2.89 0.201 -- -- -- -- 0.0252 -- -- -- -- --
185.57 0.637 2.9 -- 0.0914 -- -- -- 0.00171 0.465 -- -- -- --
166.75 0.601 2.85 -- -- 1.87 -- -- 0.0891 -- 4.765 147 23.4 2.02
186.1 0.637 2.9 -- -- -- -- -- 0.00288 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 155.60 wind 7.0 90 > th dose dependent rect. 21 6
17 157.00 wind 3.0 10 > th dose dependent rect. 1 2
19 157.10 wind 3.0 90 > th dose dependent rect. 1 1
24 157.28 wind 5.0 90 > th dose independent rect. 24 2
33 157.48 wind 7.0 90 > th dose independent rect. 20 7
114 161.91 wind 3.0 10 > th dose independent rect. 2 1
149 162.99 wind 7.0 270 > th dose independent rect. 21 1
219 165.45 wind 3.0 30 > th dose independent rect. 20 15
321 167.64 precipitation 0.1 270 > th dose independent rect. 21 1
322 167.64 precipitation 0.1 270 > th dose dependent rect. 21 1
335 167.91 wind 3.0 30 > th dose independent rect. 20 8
337 167.91 atmosphere 1010.0 1440 > th dose dependent rect. 10 2
383 168.27 atmosphere 1010.0 1440 > th dose dependent rect. 2 12
394 168.48 precipitation 0.1 10 > th dose independent rect. 21 1
405 168.48 precipitation 0.1 10 > th dose dependent rect. 21 1
475 169.03 wind 3.0 30 > th dose independent rect. 20 18
490 169.29 wind 3.0 30 > th dose independent sin 8 NA
491 169.30 wind 3.0 30 < th dose independent sin 8 NA
543 169.82 atmosphere 1010.0 1440 > th dose independent rect. 2 2
560 169.90 atmosphere 1010.0 1440 < th dose independent rect. 2 2
602 170.11 atmosphere 1010.0 1440 > th dose dependent sin 4 NA
751 170.83 wind 3.0 90 > th dose dependent sin 9 NA
810 171.09 atmosphere 1010.0 1440 > th dose dependent rect. 5 1
812 171.12 atmosphere 1010.0 270 > th dose independent rect. 23 9