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Os01g0147900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose- phosphate isomerase).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 15.2 (0.0141) R2 : 0.704
β1 : -1.03 (0.0517) R2dD : 0.27 R2D : 0.152
β2 : 0.84 (0.0335) R2dC : 0.409 R2C : 0.364
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.374 (0.0301) R2dN8 : 0.134 R2N8 : 0.0351
σ : 0.266
deviance : 32.14
__
_____
C
peak time of C : 23.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.6 0.238 15.2 -0.51 0.88 -1.09 0.177 5.17 -0.322 22.4 27.99 406 -- --
27.32 0.243 15.2 -0.916 0.891 -0.534 0.168 -- -0.366 22.5 26.6 380 -- --
25.64 0.236 15.2 -0.456 0.877 -1.21 -- 6.48 -0.34 22.6 28.45 407 -- --
27.39 0.244 15.2 -0.957 0.88 -0.516 -- -- -0.362 22.5 26.5 408 -- --
56.78 0.353 15.2 -0.631 -- -0.952 -- 1.58 -0.176 -- 22.9 27 -- --
32.09 0.266 15.2 -1.03 0.841 -- 0.116 -- -0.373 23.5 -- -- -- --
32.14 0.266 15.2 -1.03 0.84 -- -- -- -0.374 23.5 -- -- -- --
57.47 0.353 15.2 -0.841 -- -0.895 -- -- -0.222 -- 20.71 2 -- --
35.96 0.279 15.2 -- 0.774 -0.808 -- -- 0.0361 23.5 15.31 29282 -- --
76.44 0.409 15.2 -1.01 -- -- -- -- -0.365 -- -- -- -- --
60.37 0.363 15.2 -- 0.829 -- -- -- -0.259 23.4 -- -- -- --
74.5 0.402 15.1 -- -- -1.21 -- -- -0.0957 -- 17.2 2 -- --
103.48 0.475 15.2 -- -- -- -- -- -0.253 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.59 temperature 30 270 < th dose independent rect. 15 10
2 25.66 temperature 25 270 > th dose dependent rect. 10 9
3 25.67 temperature 30 270 > th dose independent rect. 11 8
18 25.68 wind 9 43200 < th dose independent rect. 13 1
33 25.73 temperature 30 270 > th dose independent sin 17 NA
34 25.73 humidity 70 90 > th dose independent rect. 17 10
36 25.76 temperature 25 90 > th dose dependent sin 17 NA
38 25.77 temperature 20 270 > th dose dependent rect. 2 16
61 25.85 temperature 25 270 > th dose dependent sin 20 NA
68 25.88 humidity 60 270 > th dose independent rect. 15 10
97 25.99 wind 9 43200 > th dose dependent rect. 13 2
103 26.03 temperature 30 270 < th dose independent sin 16 NA
126 26.13 wind 7 43200 < th dose independent rect. 10 7
127 26.14 wind 9 43200 > th dose independent rect. 13 1
131 26.15 wind 7 43200 > th dose dependent rect. 10 5
136 26.17 humidity 70 10 > th dose independent rect. 18 10
138 26.17 humidity 70 90 > th dose independent rect. 15 12
147 26.19 wind 7 43200 > th dose independent rect. 10 7
165 26.22 radiation 40 43200 > th dose dependent rect. 10 2
178 26.24 radiation 40 43200 < th dose independent rect. 10 1
183 26.25 wind 9 43200 > th dose independent rect. 10 5
184 26.25 radiation 40 43200 < th dose independent rect. 15 21
194 26.27 radiation 40 43200 > th dose independent rect. 10 1
196 26.27 wind 5 43200 > th dose dependent rect. 13 2
200 26.28 wind 7 43200 < th dose independent rect. 5 12
203 26.29 humidity 70 30 > th dose independent sin 13 NA
215 26.30 temperature 25 270 > th dose dependent rect. 10 19
224 26.31 radiation 40 43200 > th dose dependent rect. 15 21
226 26.32 wind 7 43200 > th dose independent rect. 5 12
228 26.32 radiation 40 43200 > th dose dependent rect. 8 4
250 26.33 radiation 40 43200 < th dose independent rect. 7 5
266 26.33 radiation 40 43200 < th dose independent rect. 19 17
273 26.33 temperature 25 270 > th dose dependent rect. 10 22
284 26.35 radiation 40 43200 < th dose independent sin 10 NA
333 26.37 radiation 30 14400 > th dose independent rect. 16 1
350 26.37 temperature 25 1440 > th dose dependent rect. 16 3
366 26.39 wind 7 43200 > th dose dependent rect. 10 10
393 26.41 radiation 30 14400 > th dose dependent rect. 16 1
432 26.42 radiation 40 43200 > th dose dependent sin 10 NA
441 26.43 radiation 20 43200 < th dose independent rect. 15 18
457 26.45 radiation 20 43200 < th dose independent rect. 17 16
458 26.45 wind 7 43200 < th dose independent rect. 24 17
495 26.46 wind 7 43200 > th dose independent rect. 24 17
534 26.49 radiation 20 43200 < th dose independent rect. 5 4
595 26.50 temperature 25 270 > th dose dependent rect. 12 23
624 26.52 temperature 30 270 > th dose independent no NA NA
625 26.52 radiation 20 43200 < th dose independent sin 12 NA
717 26.52 temperature 30 270 > th dose independent rect. 15 23
735 26.53 radiation 40 43200 < th dose independent rect. 14 18
791 26.55 radiation 40 43200 < th dose independent rect. 14 2
792 26.55 radiation 40 43200 < th dose independent rect. 14 5
805 26.55 humidity 50 270 > th dose independent rect. 15 23
855 26.57 radiation 40 43200 < th dose independent rect. 10 23
862 26.57 radiation 10 43200 > th dose dependent rect. 17 14
866 26.58 wind 7 43200 < th dose independent sin 23 NA
869 26.58 humidity 80 14400 > th dose independent rect. 22 7
877 26.58 wind 7 43200 > th dose dependent rect. 4 11
881 26.59 temperature 30 270 < th dose independent no NA NA
898 26.60 wind 7 43200 > th dose independent sin 0 NA
899 26.60 radiation 40 43200 < th dose independent no NA NA
909 26.60 radiation 40 43200 < th dose independent rect. 7 10