Os01g0145200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0145200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.19 | 0.454 | 9.71 | 0.693 | 0.719 | -0.837 | 0.514 | -0.525 | 0.608 | 20.8 | 70 | 1286 | -- | -- |
| 92.69 | 0.448 | 9.71 | 0.764 | 0.733 | -0.887 | 0.451 | -- | 0.534 | 20.9 | 68 | 1276 | -- | -- |
| 93.96 | 0.451 | 9.71 | 0.703 | 0.718 | -0.823 | -- | -0.419 | 0.601 | 21 | 70 | 1276 | -- | -- |
| 93.21 | 0.45 | 9.72 | 0.734 | 0.74 | -0.886 | -- | -- | 0.516 | 21.1 | 68 | 1275 | -- | -- |
| 119.03 | 0.508 | 9.7 | 0.739 | -- | -0.806 | -- | -0.0965 | 0.537 | -- | 69 | 1447 | -- | -- |
| 121.5 | 0.517 | 9.71 | 0.58 | 0.669 | -- | 0.808 | -- | 0.557 | 19.7 | -- | -- | -- | -- |
| 122.9 | 0.519 | 9.71 | 0.556 | 0.668 | -- | -- | -- | 0.556 | 20.2 | -- | -- | -- | -- |
| 119.08 | 0.508 | 9.69 | 0.733 | -- | -0.816 | -- | -- | 0.546 | -- | 68 | 1447 | -- | -- |
| 106.77 | 0.481 | 9.73 | -- | 0.726 | -0.8 | -- | -- | 0.446 | 21.1 | 68 | 1276 | -- | -- |
| 147.57 | 0.568 | 9.69 | 0.551 | -- | -- | -- | -- | 0.549 | -- | -- | -- | -- | -- |
| 131.05 | 0.535 | 9.72 | -- | 0.665 | -- | -- | -- | 0.494 | 20.3 | -- | -- | -- | -- |
| 132.43 | 0.536 | 9.72 | -- | -- | -0.726 | -- | -- | 0.428 | -- | 67.66 | 1487 | -- | -- |
| 155.58 | 0.582 | 9.71 | -- | -- | -- | -- | -- | 0.487 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.79 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 4 | 88.93 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 5 | 91.15 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 11 | 91.26 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 9 |
| 12 | 91.27 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 15 | 91.36 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 18 | 91.39 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 22 | 91.54 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 36 | 91.75 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 10 |
| 55 | 92.15 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 16 |
| 60 | 92.31 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 69 | 92.46 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 80 | 92.60 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 85 | 92.68 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 91 | 92.70 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 21 | 17 |
| 101 | 92.81 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 117 | 93.00 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 119 | 93.02 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 134 | 93.16 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 138 | 93.22 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 154 | 93.32 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 155 | 93.34 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 176 | 93.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 182 | 93.47 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 218 | 93.56 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 5 | NA |
| 221 | 93.61 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 229 | 93.66 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 12 |
| 240 | 93.68 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 249 | 93.70 | temperature | 20.0 | 270 | > th | dose independent | sin | 12 | NA |
| 251 | 93.71 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 256 | 93.72 | humidity | 70.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 274 | 93.77 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 15 |
| 294 | 93.83 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 301 | 93.85 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 304 | 93.86 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 307 | 93.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 310 | 93.87 | wind | 7.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 312 | 93.88 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 358 | 93.99 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 374 | 94.04 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 15 |
| 391 | 94.09 | wind | 1.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 394 | 94.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 397 | 94.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 413 | 94.18 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 425 | 94.20 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 12 |
| 428 | 94.21 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 429 | 94.21 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 443 | 94.24 | humidity | 70.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 449 | 94.25 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 451 | 94.25 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 477 | 94.28 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 484 | 94.29 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 490 | 94.30 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 7 |
| 491 | 94.30 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 500 | 94.33 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 505 | 94.34 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 514 | 94.36 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 519 | 94.38 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 528 | 94.39 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 529 | 94.39 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 553 | 94.43 | humidity | 70.0 | 1440 | < th | dose independent | no | NA | NA |
| 632 | 94.45 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 9 |
| 638 | 94.47 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 644 | 94.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 9 |
| 647 | 94.49 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 2 | 17 |
| 686 | 94.52 | temperature | 20.0 | 720 | > th | dose independent | rect. | 16 | 10 |
| 687 | 94.52 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 12 |
| 688 | 94.52 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 700 | 94.54 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 8 |
| 734 | 94.60 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 804 | 94.71 | temperature | 20.0 | 720 | > th | dose independent | sin | 16 | NA |
| 864 | 94.80 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 991 | 94.96 | humidity | 70.0 | 1440 | > th | dose independent | no | NA | NA |