Os01g0144000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0144000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.81 | 0.257 | 10.7 | -0.187 | 0.288 | 0.456 | -0.616 | -1.84 | -0.169 | 15 | 93.98 | 74 | -- | -- |
| 31.84 | 0.263 | 10.7 | -0.176 | 0.285 | 0.619 | -0.319 | -- | -0.178 | 14.8 | 94.69 | 89 | -- | -- |
| 30.84 | 0.259 | 10.7 | -0.199 | 0.296 | 0.484 | -- | -1.38 | -0.172 | 14.8 | 94.05 | 67 | -- | -- |
| 32.13 | 0.264 | 10.7 | -0.189 | 0.292 | 0.601 | -- | -- | -0.18 | 14.9 | 94.63 | 74 | -- | -- |
| 34.98 | 0.275 | 10.7 | -0.197 | -- | 0.226 | -- | -1.46 | -0.199 | -- | 94.11 | 67 | -- | -- |
| 33.59 | 0.272 | 10.7 | -0.164 | 0.22 | -- | -0.334 | -- | -0.208 | 14.2 | -- | -- | -- | -- |
| 34 | 0.273 | 10.7 | -0.174 | 0.219 | -- | -- | -- | -0.21 | 14.2 | -- | -- | -- | -- |
| 36.1 | 0.28 | 10.7 | -0.184 | -- | 0.465 | -- | -- | -0.209 | -- | 94.98 | 75 | -- | -- |
| 33.05 | 0.268 | 10.7 | -- | 0.288 | 0.615 | -- | -- | -0.162 | 14.8 | 94.71 | 74 | -- | -- |
| 36.87 | 0.284 | 10.7 | -0.183 | -- | -- | -- | -- | -0.215 | -- | -- | -- | -- | -- |
| 34.8 | 0.276 | 10.7 | -- | 0.223 | -- | -- | -- | -0.19 | 14.2 | -- | -- | -- | -- |
| 36.94 | 0.283 | 10.7 | -- | -- | 0.482 | -- | -- | -0.189 | -- | 95.04 | 71 | -- | -- |
| 37.76 | 0.287 | 10.7 | -- | -- | -- | -- | -- | -0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.05 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 2 | 30.42 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 4 | 30.48 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 5 | 30.48 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 8 | 30.53 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 9 | 30.58 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 8 |
| 10 | 30.61 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 11 | 30.61 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 12 | 30.61 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 14 | 30.65 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 19 | 30.68 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 24 | 30.70 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 29 | 30.73 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 1 |
| 31 | 30.73 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 33 | 30.73 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 34 | 30.73 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 37 | 30.74 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 38 | 30.74 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 20 | 7 |
| 48 | 30.77 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 57 | 30.79 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 58 | 30.79 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 59 | 30.79 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 60 | 30.80 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 70 | 30.82 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 74 | 30.82 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 98 | 30.88 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 105 | 30.89 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 121 | 30.92 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 129 | 30.95 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 130 | 30.95 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 144 | 30.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 149 | 30.97 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 150 | 30.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 158 | 30.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 166 | 30.99 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 15 | 17 |
| 168 | 31.00 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 177 | 31.00 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 180 | 31.00 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 15 | 7 |
| 191 | 31.01 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 231 | 31.04 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 255 | 31.06 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 276 | 31.08 | humidity | 70.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 279 | 31.08 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 16 | 6 |
| 309 | 31.10 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 315 | 31.10 | humidity | 90.0 | 270 | > th | dose dependent | sin | 14 | NA |
| 330 | 31.11 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 332 | 31.12 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 357 | 31.13 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 360 | 31.13 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 2 | 6 |
| 367 | 31.14 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 2 | 5 |
| 421 | 31.15 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 13 | NA |
| 448 | 31.16 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 452 | 31.16 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 465 | 31.17 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 500 | 31.18 | humidity | 70.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 524 | 31.18 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 5 |
| 532 | 31.19 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 547 | 31.19 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 551 | 31.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 571 | 31.20 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 22 |
| 579 | 31.20 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 604 | 31.21 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 620 | 31.22 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 632 | 31.23 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 657 | 31.23 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 686 | 31.24 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 11 |
| 706 | 31.24 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 726 | 31.25 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 751 | 31.25 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 15 | 21 |
| 758 | 31.25 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 855 | 31.28 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 886 | 31.28 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 891 | 31.29 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 939 | 31.29 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 5 | 12 |
| 961 | 31.30 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 972 | 31.30 | humidity | 50.0 | 14400 | > th | dose dependent | sin | 5 | NA |