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Os01g0143100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mitochondrial substrate carrier family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0202) R2 : 0.18
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.425 (0.0425) R2dN8 : 0.232 R2N8 : 0.18
σ : 0.38
deviance : 66.3
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.52 0.313 10.8 -0.362 0.161 0.832 0.616 0.905 -0.458 21 2.261 8 -- --
45.72 0.315 10.8 -0.345 0.16 0.755 0.243 -- -0.455 19.5 -2.932 7 -- --
45.22 0.313 10.8 -0.366 0.145 0.758 -- 0.46 -0.456 19.2 3.114 7 -- --
45.68 0.315 10.8 -0.35 0.148 0.754 -- -- -0.454 19.3 2.39 7 -- --
46.23 0.317 10.8 -0.371 -- 0.723 -- 0.474 -0.457 -- 4.36 7 -- --
53.83 0.344 10.8 -0.348 0.384 -- 0.0855 -- -0.457 13.7 -- -- -- --
53.86 0.344 10.8 -0.345 0.384 -- -- -- -0.456 13.6 -- -- -- --
46.74 0.318 10.8 -0.353 -- 0.715 -- -- -0.455 -- 3.74 7 -- --
48.91 0.326 10.8 -- 0.151 0.751 -- -- -0.415 19.1 2.39 7 -- --
62.87 0.37 10.8 -0.361 -- -- -- -- -0.465 -- -- -- -- --
57.01 0.353 10.8 -- 0.39 -- -- -- -0.418 13.7 -- -- -- --
50.02 0.329 10.8 -- -- 0.718 -- -- -0.416 -- 3.659 7 -- --
66.3 0.38 10.8 -- -- -- -- -- -0.425 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.54 temperature 15.0 270 > th dose independent rect. 1 15
2 38.71 wind 7.0 270 < th dose independent rect. 16 9
5 39.30 temperature 15.0 270 > th dose independent rect. 12 17
7 39.46 radiation 40.0 270 < th dose dependent rect. 16 9
9 39.60 radiation 20.0 270 < th dose independent rect. 16 9
12 39.67 temperature 15.0 270 > th dose independent rect. 10 21
13 39.84 precipitation 0.1 270 < th dose independent rect. 5 7
14 39.84 precipitation 0.1 270 < th dose dependent rect. 5 7
15 39.85 temperature 10.0 270 > th dose independent rect. 5 7
16 39.85 atmosphere 995.0 270 > th dose independent rect. 5 7
17 39.85 atmosphere 1015.0 270 < th dose independent rect. 5 7
19 39.91 radiation 20.0 270 < th dose dependent rect. 23 9
20 39.92 temperature 10.0 270 > th dose dependent rect. 12 18
24 40.00 precipitation 0.1 270 < th dose independent rect. 12 17
25 40.00 precipitation 0.1 270 < th dose dependent rect. 12 17
27 40.02 temperature 10.0 270 > th dose independent rect. 16 9
28 40.02 radiation 40.0 270 < th dose independent rect. 16 9
29 40.02 wind 9.0 270 < th dose independent rect. 1 15
31 40.02 atmosphere 1015.0 270 < th dose independent rect. 1 15
32 40.03 humidity 50.0 270 > th dose independent rect. 5 7
42 40.12 wind 9.0 270 < th dose independent rect. 5 7
47 40.19 radiation 1.0 270 > th dose independent rect. 4 8
58 40.21 radiation 20.0 90 < th dose independent rect. 1 8
59 40.23 radiation 10.0 270 < th dose independent rect. 23 8
75 40.35 atmosphere 995.0 270 > th dose independent rect. 17 8
78 40.36 radiation 40.0 10 < th dose independent rect. 3 16
81 40.38 humidity 50.0 270 > th dose independent rect. 17 8
83 40.39 radiation 40.0 10 < th dose dependent rect. 3 15
87 40.43 precipitation 0.1 270 < th dose independent rect. 1 15
88 40.43 wind 9.0 270 < th dose independent rect. 12 17
90 40.43 precipitation 0.1 270 < th dose dependent rect. 1 15
92 40.44 humidity 50.0 90 > th dose dependent rect. 1 7
94 40.45 radiation 40.0 90 < th dose dependent rect. 1 8
105 40.49 radiation 40.0 90 < th dose dependent rect. 3 15
109 40.55 radiation 40.0 10 < th dose dependent sin 4 NA
112 40.58 temperature 20.0 270 > th dose independent rect. 11 7
113 40.58 radiation 1.0 270 < th dose independent rect. 1 7
133 40.68 humidity 90.0 270 < th dose independent rect. 11 7
138 40.71 temperature 15.0 270 > th dose independent rect. 23 8
140 40.72 radiation 40.0 90 < th dose independent rect. 3 15
142 40.74 temperature 15.0 270 > th dose independent rect. 10 9
145 40.75 humidity 50.0 270 > th dose dependent rect. 23 8
150 40.77 atmosphere 1015.0 270 < th dose independent rect. 12 18
151 40.77 wind 9.0 270 < th dose dependent rect. 16 9
172 40.83 radiation 10.0 270 < th dose dependent sin 7 NA
176 40.85 radiation 1.0 90 > th dose independent rect. 7 7
182 40.88 radiation 1.0 270 > th dose independent sin 6 NA
183 40.88 precipitation 0.1 270 < th dose independent rect. 17 8
184 40.88 atmosphere 995.0 270 > th dose independent rect. 1 15
185 40.88 precipitation 0.1 270 < th dose dependent rect. 17 8
203 40.95 atmosphere 1010.0 270 < th dose independent rect. 23 7
209 40.97 humidity 70.0 270 > th dose independent rect. 23 8
211 40.98 humidity 70.0 90 > th dose independent rect. 1 7
213 40.99 atmosphere 1010.0 270 < th dose independent rect. 11 7
214 40.99 radiation 1.0 90 > th dose dependent sin 6 NA
220 41.01 temperature 10.0 90 > th dose dependent rect. 14 17
234 41.07 radiation 30.0 90 < th dose dependent sin 5 NA
244 41.10 temperature 30.0 270 < th dose independent rect. 23 8
245 41.10 humidity 50.0 270 > th dose independent rect. 23 8
247 41.10 atmosphere 995.0 270 > th dose independent rect. 23 8
249 41.10 wind 9.0 270 < th dose independent rect. 7 16
250 41.10 temperature 10.0 270 > th dose independent rect. 7 16
251 41.10 radiation 1.0 10 > th dose dependent sin 5 NA
252 41.10 temperature 10.0 270 > th dose dependent rect. 1 5
253 41.11 wind 9.0 270 < th dose independent rect. 23 8
289 41.17 precipitation 0.1 270 < th dose independent rect. 11 7
290 41.17 precipitation 0.1 270 < th dose dependent rect. 11 7
292 41.18 radiation 1.0 270 < th dose independent sin 6 NA
303 41.23 atmosphere 995.0 270 > th dose independent rect. 18 17
323 41.26 humidity 50.0 270 > th dose independent rect. 18 17
328 41.27 temperature 10.0 270 > th dose independent rect. 18 17
352 41.30 radiation 40.0 10 < th dose dependent rect. 12 21
353 41.31 wind 9.0 270 < th dose independent rect. 18 17
354 41.31 radiation 40.0 10 < th dose independent rect. 12 21
359 41.33 humidity 50.0 270 > th dose independent rect. 7 3
361 41.33 radiation 20.0 90 < th dose independent rect. 3 15
364 41.34 temperature 10.0 270 > th dose independent rect. 7 3
365 41.34 atmosphere 995.0 270 > th dose independent rect. 7 3
366 41.34 atmosphere 1015.0 270 < th dose independent rect. 7 3
367 41.34 precipitation 0.1 270 < th dose independent rect. 7 3
369 41.34 temperature 30.0 270 < th dose independent rect. 17 8
371 41.34 precipitation 0.1 270 < th dose dependent rect. 7 3
375 41.36 radiation 1.0 270 < th dose independent rect. 1 14
377 41.36 radiation 20.0 90 < th dose independent rect. 1 17
386 41.38 precipitation 0.1 270 < th dose independent rect. 23 8
389 41.38 precipitation 0.1 270 < th dose dependent rect. 23 8
392 41.39 wind 9.0 270 < th dose independent rect. 7 3
397 41.39 humidity 50.0 10 > th dose dependent rect. 3 6
408 41.42 atmosphere 995.0 270 > th dose independent rect. 12 18
413 41.43 precipitation 0.1 270 < th dose independent rect. 18 17
417 41.43 precipitation 0.1 270 < th dose dependent rect. 18 17
425 41.46 temperature 10.0 43200 > th dose independent rect. 9 6
430 41.47 radiation 40.0 90 < th dose independent rect. 13 18
448 41.50 radiation 10.0 270 < th dose dependent rect. 1 13
449 41.51 wind 1.0 270 > th dose independent rect. 17 8
471 41.53 precipitation 0.1 270 < th dose independent rect. 10 21
473 41.53 precipitation 0.1 270 < th dose dependent rect. 10 21
482 41.55 atmosphere 995.0 270 > th dose independent rect. 6 17
483 41.55 temperature 10.0 270 > th dose dependent rect. 23 8
490 41.57 wind 1.0 270 > th dose independent rect. 11 7
497 41.59 radiation 1.0 10 > th dose dependent rect. 7 5
498 41.59 radiation 1.0 10 > th dose dependent rect. 7 7
503 41.61 wind 9.0 270 < th dose independent rect. 11 7
518 41.62 atmosphere 995.0 90 > th dose independent rect. 8 17
531 41.65 radiation 40.0 10 < th dose dependent rect. 3 6
532 41.65 temperature 10.0 10 > th dose dependent rect. 14 19
547 41.67 temperature 15.0 10 > th dose independent rect. 14 18
566 41.70 precipitation 0.1 270 < th dose independent rect. 6 17
569 41.70 precipitation 0.1 270 < th dose dependent rect. 6 17
640 41.79 radiation 1.0 270 < th dose independent rect. 8 17
646 41.80 wind 1.0 90 > th dose independent rect. 7 7
659 41.82 wind 9.0 270 < th dose independent rect. 10 21
706 41.88 temperature 10.0 270 > th dose dependent rect. 11 7
723 41.92 radiation 30.0 10 < th dose independent rect. 2 7
729 41.92 radiation 1.0 270 > th dose dependent sin 9 NA
741 41.93 humidity 50.0 90 > th dose dependent rect. 18 9
766 41.97 radiation 1.0 90 > th dose dependent rect. 6 8
781 41.99 wind 9.0 90 < th dose independent rect. 3 15
811 42.02 radiation 1.0 270 > th dose dependent rect. 5 6
825 42.02 temperature 10.0 270 > th dose dependent rect. 1 17
845 42.04 temperature 15.0 10 > th dose independent rect. 12 21
946 42.12 wind 9.0 270 < th dose dependent rect. 6 18
947 42.13 wind 1.0 270 > th dose independent rect. 5 7
959 42.14 radiation 1.0 270 > th dose independent rect. 7 3
960 42.14 temperature 15.0 1440 > th dose independent rect. 10 5
972 42.15 wind 1.0 270 > th dose independent rect. 12 17
989 42.17 humidity 50.0 270 > th dose independent rect. 1 15