Os01g0139700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0139700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 189.5 | 0.647 | 9.3 | -1.08 | 0.135 | -2.96 | 1.36 | -5.42 | -0.165 | 13.8 | 0.8589 | 1436 | -- | -- |
| 195.33 | 0.651 | 9.4 | -1.56 | 0.0588 | -1.95 | -1.36 | -- | -0.296 | 2.41 | 2.771 | 1470 | -- | -- |
| 195.47 | 0.651 | 9.3 | -1.02 | 0.025 | -2.97 | -- | -5.52 | -0.148 | 12.8 | 0.8606 | 1455 | -- | -- |
| 202.09 | 0.662 | 9.39 | -1.5 | 0.0799 | -1.82 | -- | -- | -0.251 | 7.99 | 2.719 | 1455 | -- | -- |
| 195.46 | 0.651 | 9.3 | -1.02 | -- | -3.01 | -- | -5.67 | -0.149 | -- | 0.86 | 1458 | -- | -- |
| 241.56 | 0.729 | 9.33 | -1.18 | 0.06 | -- | 1.12 | -- | -0.00322 | 14.3 | -- | -- | -- | -- |
| 244.93 | 0.733 | 9.32 | -1.15 | 0.159 | -- | -- | -- | 0.00132 | 9.44 | -- | -- | -- | -- |
| 202.35 | 0.663 | 9.38 | -1.5 | -- | -1.85 | -- | -- | -0.261 | -- | 2.707 | 1461 | -- | -- |
| 254.36 | 0.743 | 9.39 | -- | 0.0724 | -1.12 | -- | -- | -0.135 | 8.97 | 7.81 | 1476 | -- | -- |
| 246.42 | 0.734 | 9.33 | -1.16 | -- | -- | -- | -- | 0.00184 | -- | -- | -- | -- | -- |
| 280.07 | 0.783 | 9.29 | -- | 0.162 | -- | -- | -- | 0.13 | 9.98 | -- | -- | -- | -- |
| 253.79 | 0.742 | 9.35 | -- | -- | -1.09 | -- | -- | -0.0604 | -- | 7.756 | 1477 | -- | -- |
| 281.65 | 0.783 | 9.3 | -- | -- | -- | -- | -- | 0.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 181.85 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 2 | 182.76 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 3 | 182.79 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 12 | 17 |
| 4 | 182.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 16 |
| 5 | 182.81 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 12 | 7 |
| 9 | 182.81 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 12 | 12 |
| 35 | 182.93 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 50 | 182.99 | radiation | 10.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 59 | 183.11 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 10 | 12 |
| 116 | 183.43 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 167 | 183.69 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 20 | NA |
| 170 | 183.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 174 | 183.75 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 175 | 183.75 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 241 | 184.16 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 261 | 184.19 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 266 | 184.20 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 21 |
| 271 | 184.21 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 13 | 23 |
| 293 | 184.33 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 295 | 184.34 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 309 | 184.34 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 23 | 20 |
| 315 | 184.34 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 21 | 22 |
| 318 | 184.35 | radiation | 10.0 | 14400 | < th | dose independent | no | NA | NA |
| 351 | 184.37 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 355 | 184.37 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 4 | 14 |
| 358 | 184.37 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 391 | 184.37 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 6 | 21 |
| 402 | 184.38 | radiation | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 465 | 184.40 | radiation | 30.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 520 | 184.43 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 1 | 10 |
| 523 | 184.44 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 525 | 184.44 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 3 | 8 |
| 573 | 184.50 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 580 | 184.51 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 641 | 184.58 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 728 | 184.71 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 732 | 184.71 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 756 | 184.76 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 759 | 184.77 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 12 | 19 |
| 800 | 184.90 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 804 | 184.90 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 806 | 184.91 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 914 | 184.99 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 12 | 19 |
| 917 | 185.00 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 12 | 7 |
| 923 | 185.00 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 12 | 15 |
| 986 | 185.07 | radiation | 30.0 | 14400 | < th | dose dependent | sin | 16 | NA |