Os01g0137500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor protein kinase-like protein.
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Os01g0137500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Receptor protein kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 233.69 | 0.718 | 5.04 | 1.26 | 0.792 | 2.04 | 0.149 | -2.8 | -0.0187 | 0.359 | 23.02 | 1288 | -- | -- |
| 237.98 | 0.718 | 4.95 | 2.04 | 0.805 | 1.8 | 0.00398 | -- | 0.192 | 0.309 | 22.6 | 1297 | -- | -- |
| 233.77 | 0.712 | 5.04 | 1.27 | 0.802 | 2.03 | -- | -2.73 | -0.0165 | 0.347 | 23 | 1297 | -- | -- |
| 237.97 | 0.718 | 4.95 | 2.05 | 0.81 | 1.79 | -- | -- | 0.187 | 0.339 | 22.57 | 1297 | -- | -- |
| 258.89 | 0.749 | 5.03 | 1.28 | -- | 2.43 | -- | -2.93 | -0.01 | -- | 23.26 | 1090 | -- | -- |
| 348.28 | 0.875 | 4.87 | 2.67 | 1.05 | -- | 0.255 | -- | 0.565 | 0.741 | -- | -- | -- | -- |
| 348.55 | 0.874 | 4.87 | 2.66 | 1.05 | -- | -- | -- | 0.564 | 0.731 | -- | -- | -- | -- |
| 264.3 | 0.757 | 4.94 | 2.02 | -- | 2.19 | -- | -- | 0.17 | -- | 22.7 | 1073 | -- | -- |
| 332.21 | 0.849 | 5.02 | -- | 0.833 | 2.48 | -- | -- | -0.144 | 0.544 | 18.79 | 2731 | -- | -- |
| 418.06 | 0.955 | 4.85 | 2.7 | -- | -- | -- | -- | 0.583 | -- | -- | -- | -- | -- |
| 535.27 | 1.08 | 4.93 | -- | 1.1 | -- | -- | -- | 0.268 | 0.844 | -- | -- | -- | -- |
| 340.11 | 0.859 | 5.09 | -- | -- | 3.25 | -- | -- | -0.507 | -- | 14.5 | 8222 | -- | -- |
| 610.31 | 1.15 | 4.92 | -- | -- | -- | -- | -- | 0.284 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 234.47 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 5 | 235.38 | radiation | 1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 6 | 235.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 23 | 236.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 34 | 236.24 | radiation | 1 | 4320 | > th | dose independent | rect. | 17 | 13 |
| 62 | 236.61 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 86 | 236.88 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 100 | 236.99 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 13 |
| 113 | 237.16 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 23 |
| 150 | 237.53 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 151 | 237.56 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 155 | 237.62 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 201 | 238.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 247 | 238.90 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 252 | 238.99 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 264 | 239.16 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 309 | 239.82 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 351 | 240.56 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 385 | 240.97 | radiation | 1 | 4320 | > th | dose independent | sin | 14 | NA |
| 474 | 242.03 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 479 | 242.08 | radiation | 1 | 4320 | < th | dose independent | sin | 14 | NA |
| 520 | 242.43 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 579 | 242.91 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 694 | 243.66 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 702 | 243.72 | radiation | 1 | 1440 | < th | dose dependent | sin | 13 | NA |
| 712 | 243.78 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 812 | 244.24 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 824 | 244.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 825 | 244.38 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 844 | 244.58 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 885 | 244.85 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 14 |
| 951 | 245.25 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 7 |
| 982 | 245.43 | temperature | 10 | 1440 | > th | dose dependent | sin | 20 | NA |