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Os01g0133400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Hexose transporter (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0129) R2 : 0.726
β1 : -0.942 (0.0471) R2dD : 0.25 R2D : 0.204
β2 : 0.902 (0.0312) R2dC : 0.504 R2C : 0.48
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.138 (0.0275) R2dN8 : 0.0203 R2N8 : -0.0121
σ : 0.242
deviance : 26.67
__
_____
C
peak time of C : 1.98
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.31 0.222 12.5 -0.851 0.971 1.4 -0.177 0.522 -0.0873 21.1 1.02 725 -- --
22.64 0.222 12.5 -0.836 0.981 1.42 -0.343 -- -0.0761 21 1.07 725 -- --
22.37 0.22 12.5 -0.851 0.968 1.37 -- 0.674 -0.0926 21.3 1.021 735 -- --
23 0.223 12.5 -0.826 0.976 1.37 -- -- -0.0846 21.4 1.02 745 -- --
29.69 0.254 12.5 -0.832 -- 1.62 -- 1.51 -0.0515 -- 0.565 1778 -- --
26.65 0.242 12.5 -0.94 0.903 -- 0.0856 -- -0.137 1.99 -- -- -- --
26.67 0.242 12.5 -0.942 0.902 -- -- -- -0.138 1.98 -- -- -- --
29.56 0.253 12.5 -0.699 -- 1.54 -- -- 0.00434 -- 1.14 1774 -- --
38.84 0.29 12.5 -- 1.27 1.81 -- -- 0.027 21.6 1.298e-07 860 -- --
75.7 0.407 12.5 -0.905 -- -- -- -- -0.117 -- -- -- -- --
50.08 0.331 12.5 -- 0.885 -- -- -- -0.0329 1.95 -- -- -- --
41.31 0.299 12.4 -- -- 1.71 -- -- 0.0914 -- 0.6 1758 -- --
97.31 0.46 12.5 -- -- -- -- -- -0.0163 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.19 temperature 25.0 90 < th dose independent rect. 13 18
2 21.20 temperature 25.0 90 < th dose independent rect. 15 16
6 21.31 temperature 30.0 30 < th dose independent rect. 12 10
10 21.42 temperature 30.0 10 < th dose dependent rect. 13 9
24 21.66 atmosphere 1000.0 30 > th dose independent rect. 22 14
37 21.79 radiation 1.0 270 > th dose independent sin 1 NA
40 21.79 radiation 1.0 720 < th dose dependent rect. 1 23
42 21.83 radiation 1.0 270 > th dose independent rect. 16 23
49 21.89 radiation 1.0 720 < th dose dependent rect. 15 16
50 21.90 wind 1.0 30 > th dose independent rect. 12 10
51 21.91 humidity 50.0 30 > th dose independent rect. 12 10
54 21.92 radiation 1.0 720 < th dose dependent rect. 19 23
55 21.93 wind 9.0 30 < th dose independent rect. 22 14
57 21.93 precipitation 0.1 30 < th dose independent rect. 22 14
58 21.93 precipitation 0.1 30 < th dose dependent rect. 22 14
59 21.94 temperature 10.0 1440 > th dose independent rect. 13 10
62 21.94 temperature 10.0 1440 > th dose independent rect. 23 14
65 21.94 atmosphere 995.0 1440 > th dose independent rect. 23 14
73 21.97 temperature 10.0 30 > th dose independent rect. 12 10
75 21.97 atmosphere 1015.0 30 < th dose independent rect. 12 10
76 21.97 precipitation 0.1 30 < th dose independent rect. 12 10
77 21.97 temperature 10.0 30 > th dose independent rect. 22 14
80 21.97 precipitation 0.1 30 < th dose dependent rect. 12 10
86 21.98 radiation 1.0 720 > th dose independent rect. 13 23
92 21.99 humidity 50.0 30 > th dose independent rect. 22 14
93 21.99 radiation 1.0 720 < th dose independent rect. 1 23
95 22.00 atmosphere 995.0 30 > th dose independent rect. 12 10
100 22.02 radiation 1.0 720 < th dose dependent sin 13 NA
123 22.07 radiation 1.0 720 < th dose independent rect. 14 17
124 22.08 radiation 1.0 720 < th dose independent sin 13 NA
136 22.10 temperature 30.0 270 < th dose independent rect. 10 22
138 22.11 radiation 1.0 720 < th dose dependent rect. 11 20
145 22.13 wind 9.0 30 < th dose independent rect. 12 10
149 22.14 radiation 1.0 720 < th dose dependent rect. 3 23
160 22.17 radiation 10.0 43200 < th dose dependent rect. 6 1
162 22.17 wind 1.0 43200 < th dose dependent rect. 21 6
167 22.18 wind 1.0 30 > th dose dependent rect. 12 10
170 22.19 humidity 50.0 270 > th dose independent rect. 12 8
173 22.19 radiation 1.0 720 < th dose independent rect. 11 20
178 22.19 radiation 1.0 720 < th dose dependent rect. 3 21
184 22.20 wind 1.0 43200 < th dose dependent rect. 18 8
188 22.21 atmosphere 1015.0 30 < th dose independent rect. 22 14
191 22.21 radiation 1.0 720 < th dose independent rect. 19 23
200 22.22 wind 1.0 43200 < th dose dependent rect. 16 12
204 22.23 radiation 1.0 270 > th dose independent rect. 6 12
234 22.24 radiation 10.0 43200 < th dose dependent rect. 18 15
246 22.25 wind 1.0 43200 < th dose dependent rect. 22 4
251 22.25 radiation 1.0 720 < th dose dependent rect. 3 15
261 22.27 radiation 1.0 270 < th dose independent rect. 23 23
287 22.29 radiation 1.0 720 > th dose independent rect. 7 23
304 22.32 radiation 10.0 43200 < th dose dependent sin 10 NA
306 22.32 radiation 1.0 720 < th dose dependent no NA NA
316 22.33 wind 1.0 270 > th dose dependent rect. 12 8
321 22.34 wind 5.0 270 > th dose independent rect. 12 18
325 22.34 radiation 1.0 720 < th dose independent rect. 3 23
329 22.35 humidity 80.0 14400 > th dose independent rect. 21 2
330 22.35 humidity 50.0 270 > th dose independent rect. 12 18
339 22.36 humidity 60.0 43200 > th dose independent rect. 11 1
343 22.36 wind 1.0 43200 < th dose dependent sin 15 NA
345 22.36 temperature 10.0 30 > th dose dependent rect. 22 14
347 22.37 humidity 60.0 43200 > th dose independent rect. 24 13
350 22.37 humidity 60.0 43200 > th dose independent rect. 18 19
375 22.38 wind 7.0 14400 > th dose dependent rect. 11 3
386 22.39 radiation 1.0 720 < th dose independent rect. 14 22
398 22.40 humidity 60.0 43200 < th dose independent rect. 24 13
432 22.41 humidity 70.0 43200 < th dose independent rect. 20 14
436 22.41 humidity 60.0 43200 < th dose independent rect. 18 19
441 22.41 radiation 1.0 720 < th dose independent rect. 3 21
467 22.42 humidity 60.0 43200 > th dose independent sin 8 NA
469 22.42 humidity 60.0 43200 > th dose independent rect. 8 5
481 22.42 wind 1.0 270 > th dose dependent rect. 12 18
490 22.43 radiation 10.0 43200 > th dose independent rect. 17 14
497 22.43 radiation 20.0 270 < th dose dependent rect. 15 15
500 22.43 radiation 1.0 720 < th dose dependent rect. 5 18
544 22.46 humidity 60.0 43200 < th dose independent rect. 10 3
548 22.46 atmosphere 1000.0 270 > th dose independent rect. 20 16
558 22.46 radiation 1.0 43200 > th dose dependent rect. 17 15
561 22.47 radiation 1.0 720 < th dose independent no NA NA
572 22.47 radiation 40.0 43200 < th dose dependent rect. 24 7
583 22.48 wind 9.0 14400 < th dose independent rect. 10 5
587 22.48 wind 9.0 14400 < th dose independent rect. 23 16
590 22.48 radiation 1.0 43200 > th dose dependent rect. 6 1
617 22.49 wind 7.0 14400 > th dose independent rect. 12 2
622 22.49 wind 9.0 14400 < th dose independent rect. 1 14
638 22.49 humidity 70.0 43200 < th dose dependent rect. 9 2
659 22.50 humidity 60.0 43200 < th dose independent sin 7 NA
660 22.50 radiation 1.0 720 > th dose independent no NA NA
662 22.50 radiation 10.0 43200 < th dose independent rect. 6 3
692 22.50 temperature 15.0 30 > th dose independent rect. 12 21
725 22.50 temperature 25.0 4320 > th dose dependent rect. 17 13
731 22.51 wind 9.0 14400 > th dose independent rect. 3 13
734 22.51 wind 9.0 14400 > th dose independent rect. 23 17
757 22.51 temperature 25.0 4320 > th dose dependent rect. 17 11
777 22.52 radiation 10.0 43200 < th dose independent rect. 23 11
792 22.52 humidity 70.0 43200 < th dose dependent rect. 23 13
807 22.53 radiation 10.0 43200 < th dose independent rect. 7 1
835 22.53 radiation 1.0 43200 > th dose dependent rect. 4 4
844 22.53 temperature 25.0 4320 > th dose dependent rect. 17 8
875 22.54 radiation 10.0 43200 < th dose independent sin 8 NA
879 22.54 humidity 70.0 43200 < th dose independent rect. 7 3
945 22.55 radiation 20.0 43200 > th dose independent rect. 16 17
950 22.55 wind 9.0 14400 > th dose independent rect. 20 20
954 22.55 radiation 1.0 43200 > th dose dependent sin 12 NA
971 22.55 radiation 1.0 270 < th dose dependent rect. 23 23
973 22.56 wind 7.0 14400 < th dose independent rect. 12 2
980 22.56 wind 9.0 14400 > th dose independent rect. 9 7
997 22.56 radiation 10.0 43200 < th dose independent rect. 15 19