Os01g0132500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1639 family protein.
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Os01g0132500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1639 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.82 | 0.269 | 2.78 | 0.137 | 0.0995 | -0.147 | 0.152 | -0.988 | 0.0717 | 8.62 | 0.9024 | 1430 | -- | -- |
| 33.32 | 0.269 | 2.79 | 0.0161 | 0.087 | -0.0406 | 0.134 | -- | 0.0418 | 8.3 | 9.803 | 1454 | -- | -- |
| 32.87 | 0.267 | 2.77 | 0.147 | 0.0927 | -0.166 | -- | -1.08 | 0.0733 | 8.65 | 0.7701 | 1451 | -- | -- |
| 33.31 | 0.269 | 2.8 | 0.0206 | 0.0949 | -0.0758 | -- | -- | 0.0388 | 8.25 | 40 | 3097 | -- | -- |
| 33.3 | 0.269 | 2.78 | 0.145 | -- | -0.201 | -- | -1.16 | 0.0791 | -- | 0.74 | 1479 | -- | -- |
| 33.38 | 0.271 | 2.79 | 0.0181 | 0.0955 | -- | 0.152 | -- | 0.0494 | 8.2 | -- | -- | -- | -- |
| 33.44 | 0.271 | 2.79 | 0.0229 | 0.0949 | -- | -- | -- | 0.0495 | 8.55 | -- | -- | -- | -- |
| 33.62 | 0.271 | 2.8 | 0.0219 | -- | -0.0777 | -- | -- | 0.051 | -- | 40 | 3097 | -- | -- |
| 33.25 | 0.269 | 2.8 | -- | 0.11 | -0.0995 | -- | -- | 0.0329 | 8.93 | 23.12 | 4151 | -- | -- |
| 33.95 | 0.272 | 2.8 | 0.0233 | -- | -- | -- | -- | 0.0504 | -- | -- | -- | -- | -- |
| 33.46 | 0.271 | 2.79 | -- | 0.095 | -- | -- | -- | 0.047 | 8.53 | -- | -- | -- | -- |
| 33.64 | 0.271 | 2.8 | -- | -- | -0.0779 | -- | -- | 0.0485 | -- | 40 | 3097 | -- | -- |
| 33.96 | 0.272 | 2.8 | -- | -- | -- | -- | -- | 0.0478 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.44 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 5 | 1 |
| 9 | 29.44 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 96 | 31.68 | radiation | 20 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 129 | 31.72 | radiation | 30 | 30 | > th | dose independent | rect. | 15 | 1 |
| 410 | 31.90 | wind | 1 | 90 | < th | dose dependent | rect. | 15 | 1 |
| 415 | 31.92 | humidity | 60 | 10 | < th | dose independent | rect. | 15 | 1 |
| 449 | 32.01 | humidity | 60 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 511 | 32.07 | wind | 1 | 90 | < th | dose independent | rect. | 15 | 1 |
| 600 | 32.11 | wind | 3 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 656 | 32.16 | humidity | 60 | 10 | < th | dose independent | sin | 13 | NA |
| 657 | 32.16 | wind | 3 | 10 | < th | dose independent | rect. | 16 | 1 |
| 684 | 32.19 | humidity | 60 | 90 | < th | dose independent | sin | 14 | NA |
| 704 | 32.19 | humidity | 60 | 10 | < th | dose dependent | sin | 13 | NA |
| 712 | 32.20 | wind | 1 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 713 | 32.20 | wind | 1 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 757 | 32.23 | wind | 5 | 10 | > th | dose independent | rect. | 10 | 1 |
| 761 | 32.23 | humidity | 60 | 10 | < th | dose independent | rect. | 10 | 1 |
| 771 | 32.23 | wind | 9 | 30 | > th | dose independent | rect. | 1 | 10 |
| 789 | 32.23 | wind | 5 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 793 | 32.23 | humidity | 60 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 802 | 32.23 | wind | 7 | 30 | > th | dose dependent | rect. | 4 | 7 |
| 853 | 32.25 | humidity | 60 | 90 | > th | dose independent | sin | 16 | NA |
| 912 | 32.30 | humidity | 60 | 10 | > th | dose independent | sin | 14 | NA |
| 952 | 32.32 | temperature | 25 | 30 | > th | dose independent | rect. | 4 | 1 |
| 966 | 32.33 | wind | 1 | 270 | < th | dose independent | rect. | 2 | 2 |
| 975 | 32.33 | humidity | 60 | 30 | < th | dose dependent | rect. | 12 | 4 |