Os01g0132400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0132400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 312.46 | 0.831 | 3.05 | 0.447 | 0.0783 | 0.679 | 1.4 | -4.27 | 0.00469 | 6.1 | 20.48 | 1801 | -- | -- |
| 322.7 | 0.843 | 3.13 | -0.00728 | 0.0347 | 1.71 | 1.35 | -- | -0.0992 | 6.26 | 20.92 | 1436 | -- | -- |
| 314.85 | 0.826 | 3.05 | 0.49 | 0.181 | 0.764 | -- | -4.54 | 0.00273 | 3.1 | 21.06 | 1394 | -- | -- |
| 321.72 | 0.835 | 3.14 | 0.173 | 0.0905 | 1.66 | -- | -- | -0.092 | 23.5 | 16.9 | 3596 | -- | -- |
| 316.57 | 0.829 | 3.05 | 0.499 | -- | 0.786 | -- | -4.03 | 0.0193 | -- | 21.4 | 1435 | -- | -- |
| 347.17 | 0.874 | 3.16 | -0.289 | 0.0607 | -- | 1.48 | -- | -0.233 | 6.35 | -- | -- | -- | -- |
| 351.36 | 0.878 | 3.16 | -0.275 | 0.157 | -- | -- | -- | -0.24 | 2.13 | -- | -- | -- | -- |
| 321.27 | 0.835 | 3.13 | 0.274 | -- | 1.86 | -- | -- | -0.105 | -- | 15.83 | 3367 | -- | -- |
| 320.99 | 0.834 | 3.13 | -- | 0.0919 | 2.2 | -- | -- | -0.137 | 2.4 | 15.02 | 3121 | -- | -- |
| 352.83 | 0.878 | 3.16 | -0.268 | -- | -- | -- | -- | -0.236 | -- | -- | -- | -- | -- |
| 353.35 | 0.879 | 3.16 | -- | 0.151 | -- | -- | -- | -0.21 | 2.09 | -- | -- | -- | -- |
| 322 | 0.836 | 3.14 | -- | -- | 2.43 | -- | -- | -0.138 | -- | 14.9 | 3140 | -- | -- |
| 354.73 | 0.879 | 3.15 | -- | -- | -- | -- | -- | -0.207 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 307.67 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 19 |
| 14 | 310.04 | humidity | 60 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 15 | 310.05 | humidity | 60 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 18 | 310.29 | humidity | 60 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 21 | 310.60 | humidity | 50 | 14400 | < th | dose dependent | rect. | 17 | 18 |
| 22 | 310.65 | atmosphere | 1010 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 23 | 310.79 | temperature | 20 | 720 | > th | dose independent | sin | 0 | NA |
| 32 | 311.33 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 18 |
| 33 | 311.36 | temperature | 20 | 720 | < th | dose independent | rect. | 7 | 19 |
| 34 | 311.40 | atmosphere | 1010 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 40 | 311.62 | temperature | 20 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 57 | 311.89 | humidity | 50 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 59 | 311.96 | temperature | 20 | 720 | < th | dose independent | sin | 22 | NA |
| 69 | 312.08 | humidity | 60 | 14400 | < th | dose dependent | rect. | 18 | 15 |
| 73 | 312.28 | temperature | 20 | 1440 | < th | dose dependent | rect. | 22 | 5 |
| 77 | 312.35 | temperature | 20 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 93 | 312.56 | humidity | 50 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 106 | 312.67 | temperature | 20 | 4320 | < th | dose dependent | rect. | 24 | 15 |
| 108 | 312.68 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 13 |
| 118 | 312.76 | humidity | 50 | 14400 | < th | dose dependent | rect. | 8 | 3 |
| 142 | 312.81 | temperature | 20 | 1440 | < th | dose dependent | sin | 13 | NA |
| 143 | 312.82 | temperature | 20 | 4320 | < th | dose dependent | rect. | 2 | 2 |
| 173 | 312.94 | temperature | 25 | 270 | < th | dose dependent | rect. | 2 | 21 |
| 216 | 313.04 | temperature | 20 | 1440 | < th | dose dependent | rect. | 10 | 20 |
| 218 | 313.06 | temperature | 20 | 1440 | < th | dose dependent | rect. | 16 | 19 |
| 248 | 313.16 | temperature | 20 | 4320 | < th | dose dependent | sin | 4 | NA |
| 254 | 313.18 | humidity | 50 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 271 | 313.22 | temperature | 25 | 1440 | < th | dose dependent | sin | 1 | NA |
| 276 | 313.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 290 | 313.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 17 |
| 381 | 313.47 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 20 |
| 392 | 313.49 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 22 |
| 517 | 313.69 | humidity | 50 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 570 | 313.75 | temperature | 20 | 1440 | < th | dose dependent | rect. | 19 | 22 |
| 587 | 313.78 | temperature | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 722 | 313.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 20 |
| 775 | 314.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 799 | 314.14 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 832 | 314.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 888 | 314.29 | temperature | 15 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 935 | 314.35 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 966 | 314.41 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 15 |