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Os01g0131800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Signal peptidase 22 kDa subunit family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.92 (0.0159) R2 : 0.479
β1 : 0.81 (0.0581) R2dD : 0.231 R2D : 0.197
β2 : 0.632 (0.0414) R2dC : 0.268 R2C : 0.25
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.128 (0.0339) R2dN8 : 0.0219 R2N8 : -0.0112
σ : 0.298
deviance : 40.54
__
_____
C
peak time of C : 17.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.73 0.273 9.92 0.794 0.6 0.48 -0.178 0.394 0.141 17.8 48 1381 -- --
33.86 0.271 9.92 0.846 0.591 0.568 -0.0265 -- 0.148 18.3 41.68 1262 -- --
33.76 0.271 9.92 0.797 0.599 0.498 -- 0.371 0.137 18 44 1356 -- --
33.86 0.271 9.92 0.843 0.594 0.573 -- -- 0.147 18.3 43 1260 -- --
51.74 0.335 9.91 0.815 -- 0.602 -- 0.235 0.148 -- 46.01 1311 -- --
40.48 0.298 9.92 0.809 0.633 -- -0.165 -- 0.129 17.7 -- -- -- --
40.54 0.298 9.92 0.81 0.632 -- -- -- 0.128 17.7 -- -- -- --
51.79 0.335 9.91 0.833 -- 0.634 -- -- 0.141 -- 44 1302 -- --
51.29 0.334 9.92 -- 0.585 0.599 -- -- 0.114 17.8 79.84 1418 -- --
61.26 0.366 9.91 0.79 -- -- -- -- 0.113 -- -- -- -- --
57.82 0.356 9.94 -- 0.619 -- -- -- 0.0379 17.8 -- -- -- --
68.7 0.386 9.91 -- -- 0.792 -- -- 0.122 -- 78 1335 -- --
77.71 0.411 9.93 -- -- -- -- -- 0.0255 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.60 precipitation 0.1 270 < th dose independent rect. 2 15
2 31.60 precipitation 0.1 270 < th dose dependent rect. 2 15
3 32.16 precipitation 0.1 270 < th dose independent rect. 3 2
4 32.16 precipitation 0.1 270 < th dose dependent rect. 3 2
5 32.31 radiation 10.0 270 < th dose independent rect. 17 9
8 32.39 wind 9.0 90 < th dose dependent rect. 3 5
9 32.40 precipitation 0.1 270 < th dose independent rect. 13 17
11 32.40 precipitation 0.1 270 < th dose dependent rect. 13 17
12 32.41 atmosphere 995.0 270 > th dose independent rect. 17 9
13 32.42 temperature 10.0 270 > th dose independent rect. 17 9
17 32.42 temperature 10.0 270 > th dose independent rect. 2 15
18 32.42 atmosphere 1015.0 270 < th dose independent rect. 2 15
19 32.42 radiation 40.0 270 < th dose dependent rect. 17 9
20 32.43 wind 9.0 270 < th dose independent rect. 17 9
22 32.46 precipitation 0.1 90 < th dose independent rect. 3 5
23 32.46 precipitation 0.1 90 < th dose dependent rect. 3 5
24 32.48 wind 5.0 270 < th dose independent rect. 3 2
25 32.48 wind 9.0 270 < th dose independent rect. 2 15
30 32.49 wind 5.0 90 < th dose independent rect. 3 5
31 32.49 humidity 80.0 720 < th dose dependent rect. 20 1
33 32.52 humidity 50.0 270 > th dose independent rect. 17 9
34 32.56 temperature 25.0 270 < th dose independent rect. 3 2
35 32.57 precipitation 0.1 270 < th dose independent rect. 1 6
36 32.57 precipitation 0.1 270 < th dose dependent rect. 1 6
37 32.59 humidity 80.0 720 < th dose independent rect. 19 2
44 32.68 wind 5.0 270 < th dose independent rect. 1 6
46 32.68 wind 9.0 270 < th dose dependent rect. 3 2
55 32.74 temperature 10.0 90 > th dose dependent rect. 19 8
59 32.76 wind 3.0 14400 < th dose dependent rect. 3 2
66 32.80 wind 9.0 90 < th dose independent rect. 8 19
69 32.81 temperature 10.0 90 > th dose independent rect. 3 5
71 32.81 temperature 30.0 90 < th dose independent rect. 3 5
72 32.81 humidity 50.0 90 > th dose independent rect. 3 5
74 32.81 atmosphere 995.0 90 > th dose independent rect. 3 5
75 32.81 atmosphere 1015.0 90 < th dose independent rect. 3 5
77 32.81 temperature 10.0 90 > th dose independent rect. 8 19
79 32.85 radiation 40.0 90 < th dose independent rect. 3 5
82 32.86 temperature 10.0 270 > th dose independent rect. 3 2
85 32.86 humidity 50.0 270 > th dose independent rect. 3 2
88 32.86 atmosphere 995.0 270 > th dose independent rect. 3 2
89 32.86 atmosphere 1010.0 270 < th dose independent rect. 3 2
91 32.86 radiation 20.0 270 < th dose independent rect. 3 2
94 32.86 temperature 10.0 270 > th dose independent rect. 5 22
96 32.87 temperature 30.0 270 < th dose dependent rect. 3 2
97 32.87 radiation 40.0 270 < th dose dependent rect. 3 2
99 32.88 humidity 50.0 90 > th dose dependent rect. 18 9
103 32.91 radiation 1.0 270 < th dose dependent rect. 3 2
105 32.92 radiation 1.0 270 < th dose independent rect. 3 2
108 32.94 precipitation 0.1 270 < th dose independent rect. 17 9
110 32.94 precipitation 0.1 270 < th dose dependent rect. 17 9
113 32.95 wind 9.0 90 < th dose independent rect. 19 8
114 32.96 temperature 10.0 90 > th dose independent rect. 19 8
115 32.96 temperature 30.0 90 < th dose independent rect. 19 8
116 32.96 humidity 50.0 90 > th dose independent rect. 19 8
118 32.96 atmosphere 995.0 90 > th dose independent rect. 19 8
119 32.96 radiation 1.0 90 < th dose independent rect. 19 8
126 32.96 radiation 1.0 90 < th dose dependent rect. 19 8
131 32.97 wind 5.0 90 < th dose independent rect. 19 8
132 32.98 wind 9.0 270 < th dose independent rect. 13 17
134 32.99 temperature 10.0 270 > th dose independent rect. 1 6
136 32.99 temperature 30.0 270 < th dose independent rect. 1 6
137 32.99 humidity 50.0 270 > th dose independent rect. 1 6
139 32.99 atmosphere 995.0 270 > th dose independent rect. 1 6
140 32.99 atmosphere 1015.0 270 < th dose independent rect. 1 6
141 32.99 radiation 40.0 270 < th dose independent rect. 1 6
143 32.99 wind 9.0 90 < th dose dependent rect. 19 8
147 33.00 temperature 10.0 270 > th dose independent rect. 6 7
148 33.00 atmosphere 995.0 270 > th dose independent rect. 6 7
149 33.00 atmosphere 1015.0 270 < th dose independent rect. 6 7
150 33.00 temperature 10.0 270 > th dose independent rect. 13 17
151 33.01 humidity 70.0 14400 < th dose independent rect. 17 1
156 33.02 wind 9.0 270 < th dose independent rect. 6 7
162 33.03 precipitation 0.1 270 < th dose independent rect. 6 7
164 33.03 wind 9.0 270 < th dose independent rect. 5 22
165 33.03 precipitation 0.1 270 < th dose dependent rect. 6 7
175 33.06 humidity 80.0 720 < th dose dependent rect. 19 3
178 33.07 humidity 60.0 14400 > th dose independent rect. 14 5
180 33.07 wind 9.0 270 < th dose dependent rect. 1 6
182 33.08 humidity 60.0 14400 < th dose independent rect. 14 4
190 33.10 atmosphere 995.0 270 > th dose independent rect. 2 15
191 33.10 wind 1.0 270 > th dose independent rect. 13 17
192 33.11 humidity 60.0 14400 > th dose independent rect. 14 13
209 33.13 humidity 60.0 14400 < th dose independent rect. 14 18
233 33.16 humidity 50.0 270 > th dose independent rect. 6 7
235 33.17 precipitation 0.1 90 < th dose independent rect. 19 8
239 33.17 humidity 50.0 270 > th dose dependent rect. 3 2
240 33.17 precipitation 0.1 90 < th dose dependent rect. 19 8
242 33.18 atmosphere 995.0 90 > th dose independent rect. 8 19
246 33.19 temperature 30.0 270 < th dose independent rect. 6 8
247 33.19 precipitation 0.1 14400 < th dose independent rect. 5 14
248 33.19 precipitation 0.1 14400 < th dose dependent rect. 5 14
249 33.20 humidity 60.0 14400 < th dose independent sin 16 NA
266 33.20 temperature 10.0 270 > th dose independent rect. 6 20
268 33.20 humidity 60.0 14400 > th dose independent rect. 14 23
273 33.21 humidity 60.0 14400 > th dose independent sin 13 NA
290 33.22 humidity 80.0 1440 > th dose independent rect. 19 19
297 33.23 precipitation 0.1 14400 > th dose independent rect. 6 13
298 33.23 humidity 60.0 14400 < th dose independent rect. 13 21
304 33.24 humidity 60.0 14400 > th dose independent rect. 9 10
320 33.25 humidity 60.0 14400 < th dose independent rect. 11 7
323 33.25 humidity 70.0 14400 < th dose independent rect. 17 16
324 33.25 humidity 60.0 14400 > th dose independent rect. 22 21
326 33.25 humidity 60.0 14400 > th dose independent rect. 9 23
328 33.25 humidity 60.0 14400 < th dose independent rect. 11 23
351 33.26 humidity 60.0 14400 > th dose independent rect. 1 17
372 33.27 humidity 60.0 14400 > th dose independent no NA NA
378 33.27 precipitation 0.1 10 < th dose independent rect. 3 6
466 33.27 precipitation 0.1 10 < th dose dependent rect. 3 6
499 33.28 wind 9.0 270 < th dose independent rect. 6 20
506 33.28 humidity 70.0 14400 < th dose dependent rect. 16 18
526 33.29 humidity 60.0 14400 < th dose independent rect. 9 23
569 33.30 humidity 60.0 14400 < th dose independent rect. 14 23
570 33.30 humidity 70.0 14400 < th dose dependent rect. 17 1
571 33.30 radiation 40.0 270 < th dose dependent rect. 1 6
580 33.31 temperature 30.0 270 < th dose independent rect. 17 9
588 33.31 humidity 60.0 14400 < th dose independent rect. 7 12
615 33.31 humidity 60.0 14400 > th dose independent rect. 17 23
632 33.33 humidity 60.0 14400 < th dose independent no NA NA
736 33.33 radiation 40.0 270 < th dose dependent rect. 2 4
815 33.36 humidity 70.0 14400 < th dose dependent sin 11 NA
840 33.37 wind 9.0 90 < th dose dependent rect. 8 19
862 33.38 humidity 60.0 14400 < th dose independent rect. 17 23
863 33.38 wind 1.0 14400 > th dose dependent rect. 3 1
881 33.40 precipitation 0.1 14400 < th dose independent sin 0 NA
900 33.40 precipitation 0.1 14400 < th dose dependent sin 0 NA
919 33.41 radiation 1.0 270 < th dose independent rect. 6 20
933 33.42 precipitation 0.1 14400 < th dose independent rect. 8 9
946 33.42 humidity 70.0 14400 < th dose dependent rect. 14 5
948 33.42 precipitation 0.1 14400 < th dose dependent rect. 8 9
966 33.43 temperature 10.0 10 > th dose dependent rect. 20 8
968 33.44 precipitation 0.1 14400 > th dose independent sin 0 NA
972 33.44 precipitation 0.1 14400 > th dose independent rect. 8 9
979 33.44 radiation 1.0 270 < th dose dependent rect. 5 21
980 33.45 humidity 70.0 1440 > th dose independent rect. 17 2
993 33.46 humidity 80.0 1440 > th dose independent rect. 20 1
999 33.46 humidity 80.0 1440 < th dose dependent sin 14 NA