Os01g0131300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0131300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.17 | 0.305 | 13.1 | -0.0594 | 0.733 | -0.91 | 0.309 | 0.739 | -0.37 | 12 | 24.29 | 861 | -- | -- |
| 42.93 | 0.305 | 13 | 0.00656 | 0.692 | -1 | 0.39 | -- | -0.35 | 11.9 | 23.94 | 836 | -- | -- |
| 42.53 | 0.304 | 13.1 | -0.0773 | 0.736 | -0.894 | -- | 0.938 | -0.377 | 12 | 24.37 | 866 | -- | -- |
| 43.55 | 0.307 | 13 | 0.0754 | 0.724 | -1.02 | -- | -- | -0.339 | 12 | 23.77 | 830 | -- | -- |
| 62.21 | 0.369 | 13 | 0.161 | -- | -1.1 | -- | -0.478 | -0.343 | -- | 24.8 | 1622 | -- | -- |
| 56.81 | 0.353 | 13 | 0.334 | 0.621 | -- | 0.515 | -- | -0.154 | 12.2 | -- | -- | -- | -- |
| 57.96 | 0.357 | 13 | 0.354 | 0.619 | -- | -- | -- | -0.152 | 12.1 | -- | -- | -- | -- |
| 53.41 | 0.34 | 13.1 | 0.0784 | -- | -1.19 | -- | -- | -0.381 | -- | 29.94 | 5 | -- | -- |
| 43.65 | 0.308 | 13 | -- | 0.739 | -1.05 | -- | -- | -0.351 | 11.9 | 23.8 | 833 | -- | -- |
| 82.07 | 0.423 | 13 | 0.335 | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
| 61.26 | 0.366 | 13 | -- | 0.614 | -- | -- | -- | -0.192 | 12.1 | -- | -- | -- | -- |
| 53.42 | 0.34 | 13.1 | -- | -- | -1.2 | -- | -- | -0.393 | -- | 30 | 2 | -- | -- |
| 85.02 | 0.43 | 13 | -- | -- | -- | -- | -- | -0.198 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.70 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 18 |
| 2 | 40.71 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 3 | 40.72 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 9 | 41.24 | temperature | 15 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 17 | 41.66 | temperature | 15 | 10 | > th | dose dependent | sin | 5 | NA |
| 20 | 41.71 | temperature | 30 | 10 | < th | dose dependent | sin | 5 | NA |
| 24 | 41.75 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 30 | 41.94 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 10 |
| 33 | 41.98 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 36 | 42.01 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 17 |
| 41 | 42.06 | temperature | 20 | 270 | > th | dose dependent | sin | 7 | NA |
| 47 | 42.11 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 61 | 42.27 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 20 |
| 68 | 42.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 22 |
| 85 | 42.46 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 87 | 42.47 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 140 | 42.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 173 | 42.77 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 197 | 42.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 199 | 42.87 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 219 | 42.93 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 244 | 43.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 251 | 43.04 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 262 | 43.09 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 266 | 43.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 3 |
| 273 | 43.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 19 |
| 295 | 43.21 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 18 |
| 301 | 43.23 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 345 | 43.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 15 |
| 356 | 43.38 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 20 |
| 370 | 43.41 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 434 | 43.54 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 18 |
| 452 | 43.59 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 471 | 43.61 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 486 | 43.65 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 529 | 43.73 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 580 | 43.83 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 12 |
| 636 | 43.92 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 676 | 43.98 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 688 | 44.00 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 16 |
| 689 | 44.00 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 21 |
| 762 | 44.10 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 3 |
| 855 | 44.21 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 17 |
| 876 | 44.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 971 | 44.34 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 983 | 44.35 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |