Os01g0122000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0122000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 184.16 | 0.638 | 9.96 | -0.569 | 1.71 | -1.72 | -0.684 | 0.523 | 0.0252 | 23.1 | 24.7 | 1398 | -- | -- |
| 182.81 | 0.63 | 9.95 | -0.435 | 1.74 | -1.59 | -0.698 | -- | 0.0721 | 23.2 | 24.3 | 1399 | -- | -- |
| 184.54 | 0.633 | 9.96 | -0.513 | 1.73 | -1.61 | -- | 0.394 | 0.057 | 23.3 | 24.37 | 1396 | -- | -- |
| 184.67 | 0.633 | 9.94 | -0.392 | 1.72 | -1.54 | -- | -- | 0.0729 | 23.3 | 24.28 | 1401 | -- | -- |
| 324.6 | 0.839 | 9.96 | -0.505 | -- | -2.12 | -- | 0.784 | 0.000968 | -- | 25.3 | 2309 | -- | -- |
| 273.47 | 0.775 | 9.81 | 0.176 | 1.8 | -- | -0.549 | -- | 0.676 | 23.5 | -- | -- | -- | -- |
| 274.73 | 0.776 | 9.8 | 0.197 | 1.8 | -- | -- | -- | 0.678 | 23.5 | -- | -- | -- | -- |
| 281.39 | 0.781 | 9.98 | -0.419 | -- | -2.17 | -- | -- | -0.168 | -- | 25.19 | 926 | -- | -- |
| 188.53 | 0.639 | 9.93 | -- | 1.76 | -1.47 | -- | -- | 0.113 | 23.3 | 24.2 | 1401 | -- | -- |
| 477.91 | 1.02 | 9.76 | 0.246 | -- | -- | -- | -- | 0.698 | -- | -- | -- | -- | -- |
| 275.75 | 0.777 | 9.81 | -- | 1.8 | -- | -- | -- | 0.656 | 23.5 | -- | -- | -- | -- |
| 285 | 0.786 | 9.93 | -- | -- | -2.18 | -- | -- | -0.0331 | -- | 25.11 | 917 | -- | -- |
| 479.51 | 1.02 | 9.77 | -- | -- | -- | -- | -- | 0.67 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 183.61 | temperature | 25 | 1440 | < th | dose independent | rect. | 2 | 20 |
| 10 | 184.70 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 21 |
| 11 | 184.72 | temperature | 25 | 1440 | > th | dose independent | rect. | 2 | 20 |
| 14 | 184.76 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |
| 18 | 184.86 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 17 |
| 66 | 185.59 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 17 |
| 67 | 185.59 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 68 | 185.59 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 23 |
| 69 | 185.60 | temperature | 25 | 1440 | > th | dose independent | sin | 19 | NA |
| 93 | 185.87 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 114 | 186.06 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 8 |
| 118 | 186.10 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 127 | 186.18 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 129 | 186.19 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 153 | 186.49 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 14 |
| 154 | 186.49 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 156 | 186.51 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 176 | 186.70 | temperature | 25 | 1440 | > th | dose independent | no | NA | NA |
| 188 | 186.82 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 18 |
| 213 | 187.06 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 244 | 187.32 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 9 |
| 245 | 187.32 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 336 | 188.56 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 2 |
| 341 | 188.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 376 | 188.98 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 8 |
| 395 | 189.18 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 397 | 189.19 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 6 |
| 459 | 189.74 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 478 | 189.88 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 503 | 190.10 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 670 | 191.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 14 |
| 734 | 191.87 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 736 | 191.87 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 772 | 192.08 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 868 | 192.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 919 | 192.87 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 924 | 192.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 5 |