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Os01g0121600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.34 (0.0255) R2 : 0.436
β1 : -0.991 (0.0945) R2dD : 0.152 R2D : 0.0821
β2 : 0.564 (0.0626) R2dC : 0.106 R2C : 0.164
β3 : -1.24 (0.108) R2dE : 0.207 R2E : 0.184
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0956 (0.0579) R2dN8 : 0.00534 R2N8 : -0.0265
σ : 0.465
deviance : 99.78
__
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C
peak time of C : 9.41
E
wheather : temperature
threshold : 27.4
memory length : 17
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
99.2 0.468 9.35 -1.1 0.562 -1.22 0.00674 0.657 -0.118 9.38 27.85 15 -- --
99.78 0.465 9.35 -0.998 0.565 -1.27 -0.0794 -- -0.118 9.31 27.42 20 -- --
99.18 0.464 9.35 -1.09 0.562 -1.22 -- 0.616 -0.118 9.41 27.7 14 -- --
99.78 0.465 9.34 -0.991 0.564 -1.24 -- -- -0.0956 9.41 27.4 17 -- --
116.56 0.506 9.38 -1.12 -- -1.43 -- 0.543 -0.151 -- 27.8 13 -- --
121.33 0.516 9.28 -0.678 0.77 -- -0.27 -- 0.179 11.2 -- -- -- --
121.64 0.516 9.28 -0.689 0.771 -- -- -- 0.178 11.2 -- -- -- --
116.73 0.503 9.37 -1.04 -- -1.46 -- -- -0.139 -- 27.5 2 -- --
122.89 0.519 9.3 -- 0.612 -0.838 -- -- 0.094 10.2 27.3 18 -- --
158.8 0.589 9.3 -0.708 -- -- -- -- 0.171 -- -- -- -- --
134.15 0.542 9.26 -- 0.778 -- -- -- 0.255 11.3 -- -- -- --
143.24 0.559 9.33 -- -- -1.16 -- -- 0.0345 -- 27.5 2 -- --
172.02 0.612 9.28 -- -- -- -- -- 0.25 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 93.18 wind 5.0 14400 > th dose dependent rect. 14 1
2 94.09 wind 7.0 14400 < th dose independent rect. 14 1
3 94.56 wind 7.0 14400 > th dose independent rect. 14 1
4 95.12 wind 7.0 43200 > th dose dependent rect. 18 2
5 95.47 precipitation 0.1 14400 < th dose independent rect. 5 2
6 95.47 precipitation 0.1 14400 < th dose dependent rect. 5 2
10 95.61 precipitation 0.1 14400 > th dose dependent rect. 5 2
11 95.64 precipitation 0.1 14400 > th dose independent rect. 5 2
16 96.45 wind 5.0 14400 > th dose independent rect. 11 8
18 96.50 wind 5.0 14400 < th dose independent rect. 11 6
19 96.53 wind 5.0 14400 < th dose independent rect. 11 8
20 96.57 wind 9.0 43200 > th dose independent rect. 18 3
21 96.63 wind 5.0 14400 > th dose independent rect. 11 6
25 96.66 temperature 25.0 10 < th dose dependent rect. 24 19
29 96.73 wind 9.0 43200 < th dose independent rect. 18 3
48 97.07 atmosphere 1005.0 43200 < th dose independent rect. 2 1
49 97.10 temperature 25.0 10 < th dose dependent rect. 24 22
53 97.14 wind 9.0 43200 > th dose dependent rect. 18 5
78 97.47 temperature 25.0 90 < th dose dependent rect. 24 23
83 97.63 atmosphere 1005.0 43200 > th dose independent rect. 2 1
93 97.81 wind 7.0 43200 > th dose independent rect. 18 1
123 98.14 radiation 1.0 4320 < th dose dependent rect. 17 1
129 98.20 radiation 1.0 1440 < th dose dependent rect. 14 15
136 98.26 atmosphere 1005.0 43200 > th dose independent rect. 11 1
143 98.36 atmosphere 1005.0 43200 < th dose independent rect. 11 1
146 98.40 radiation 1.0 1440 < th dose dependent rect. 15 4
150 98.41 radiation 1.0 1440 < th dose dependent rect. 15 7
151 98.42 radiation 1.0 1440 < th dose dependent rect. 15 11
154 98.43 radiation 1.0 1440 < th dose dependent rect. 15 9
198 98.69 radiation 1.0 1440 < th dose dependent rect. 8 21
207 98.75 radiation 1.0 1440 < th dose dependent sin 17 NA
232 98.87 humidity 50.0 14400 > th dose independent rect. 13 1
249 98.91 temperature 10.0 720 > th dose dependent rect. 21 21
257 98.95 radiation 1.0 1440 < th dose dependent rect. 8 11
259 98.96 radiation 1.0 1440 < th dose dependent rect. 8 14
263 98.97 radiation 1.0 1440 < th dose dependent rect. 8 16
266 98.98 radiation 1.0 1440 < th dose dependent rect. 8 18
288 99.13 temperature 20.0 720 > th dose dependent rect. 21 21
293 99.16 atmosphere 1005.0 43200 > th dose independent rect. 4 1
325 99.26 temperature 30.0 270 < th dose dependent rect. 9 21
369 99.40 temperature 30.0 10 < th dose dependent rect. 9 23
370 99.41 humidity 50.0 14400 < th dose independent rect. 13 1
371 99.41 atmosphere 1005.0 43200 > th dose independent rect. 1 12
396 99.46 atmosphere 1005.0 43200 < th dose independent rect. 1 12
428 99.55 temperature 30.0 10 < th dose dependent rect. 19 23
430 99.56 humidity 50.0 14400 > th dose independent rect. 11 3
452 99.59 temperature 25.0 1440 < th dose independent rect. 11 10
487 99.62 humidity 50.0 14400 > th dose independent rect. 18 21
494 99.63 temperature 30.0 10 < th dose dependent rect. 11 23
531 99.71 temperature 25.0 1440 < th dose independent rect. 9 11
581 99.77 temperature 30.0 10 < th dose dependent rect. 13 23
587 99.79 radiation 1.0 720 < th dose dependent rect. 5 16
588 99.80 humidity 50.0 14400 > th dose independent rect. 8 7
599 99.81 humidity 50.0 14400 > th dose independent rect. 5 10
603 99.81 temperature 10.0 270 > th dose dependent rect. 3 22
605 99.82 temperature 25.0 1440 < th dose independent rect. 14 6
608 99.82 humidity 50.0 14400 > th dose independent rect. 24 15
609 99.82 humidity 50.0 14400 > th dose independent rect. 22 17
627 99.84 radiation 1.0 720 < th dose dependent rect. 14 21
628 99.85 atmosphere 1005.0 43200 > th dose independent sin 6 NA
630 99.85 atmosphere 1005.0 43200 < th dose independent rect. 7 6
652 99.88 temperature 25.0 1440 < th dose independent rect. 16 1
660 99.88 temperature 20.0 720 > th dose dependent rect. 12 22
663 99.90 atmosphere 1005.0 43200 < th dose independent sin 5 NA
687 99.93 radiation 1.0 1440 < th dose independent rect. 15 3
689 99.93 atmosphere 1005.0 43200 > th dose independent rect. 6 7
704 99.95 humidity 50.0 14400 < th dose independent rect. 9 5
724 99.96 temperature 30.0 10 < th dose dependent no NA NA
725 99.97 radiation 1.0 1440 > th dose independent rect. 15 3
728 99.97 temperature 25.0 1440 > th dose independent rect. 11 9
746 99.98 radiation 1.0 720 < th dose dependent rect. 22 23
834 100.07 radiation 1.0 720 < th dose dependent rect. 24 23
841 100.09 temperature 25.0 1440 < th dose independent rect. 15 3
850 100.10 temperature 25.0 1440 > th dose independent rect. 13 7
857 100.10 temperature 30.0 90 < th dose dependent rect. 7 23
904 100.14 temperature 25.0 10 < th dose dependent sin 3 NA
937 100.17 temperature 10.0 720 > th dose dependent rect. 12 23
945 100.18 temperature 30.0 10 < th dose dependent rect. 17 23
983 100.24 temperature 25.0 1440 > th dose independent rect. 16 1
994 100.24 temperature 30.0 10 < th dose dependent rect. 15 23