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Os01g0120800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0216) R2 : 0.525
β1 : 1.51 (0.0791) R2dD : 0.396 R2D : 0.303
β2 : 0.633 (0.056) R2dC : 0.134 R2C : 0.0967
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.386 (0.0461) R2dN8 : 0.0982 R2N8 : 0.00433
σ : 0.406
deviance : 75.12
__
_____
C
peak time of C : 17
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
65.12 0.379 11.9 1.56 0.58 0.813 0.827 -0.46 0.438 17.3 80 1363 -- --
65.11 0.376 11.9 1.54 0.554 0.787 0.869 -- 0.437 17.5 80 1291 -- --
66.75 0.381 11.9 1.56 0.59 0.826 -- -0.377 0.443 17 80.37 1377 -- --
66.22 0.379 11.9 1.55 0.565 0.824 -- -- 0.426 17.5 78.62 1270 -- --
83.18 0.425 11.8 1.54 -- 0.969 -- -0.288 0.439 -- 80.12 1291 -- --
73.23 0.401 11.9 1.51 0.628 -- 0.874 -- 0.382 17.1 -- -- -- --
75.12 0.406 11.9 1.51 0.633 -- -- -- 0.386 17 -- -- -- --
82.49 0.423 11.9 1.54 -- 0.981 -- -- 0.416 -- 78.58 1271 -- --
127.55 0.526 11.9 -- 0.792 0.788 -- -- 0.277 17.3 81.15 1914 -- --
96.2 0.458 11.9 1.49 -- -- -- -- 0.37 -- -- -- -- --
135.33 0.544 11.9 -- 0.606 -- -- -- 0.218 17 -- -- -- --
109.24 0.487 11.9 -- -- 1.34 -- -- 0.142 -- 64.99 47520 -- --
154.63 0.58 11.9 -- -- -- -- -- 0.205 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 61.14 precipitation 0.1 270 < th dose independent rect. 10 23
2 61.14 precipitation 0.1 270 < th dose dependent rect. 10 23
3 61.94 humidity 90.0 720 > th dose dependent rect. 18 8
8 62.20 temperature 10.0 270 > th dose dependent rect. 9 1
11 62.40 humidity 50.0 720 > th dose dependent rect. 18 9
14 62.45 humidity 90.0 720 > th dose dependent rect. 9 17
17 62.51 radiation 10.0 1440 > th dose independent rect. 11 4
20 62.56 radiation 10.0 1440 > th dose independent rect. 11 2
27 62.72 humidity 90.0 720 > th dose dependent rect. 15 11
33 62.80 precipitation 0.1 10 < th dose independent rect. 14 19
34 62.80 precipitation 0.1 10 < th dose dependent rect. 14 19
44 62.95 humidity 90.0 10 < th dose independent rect. 2 7
47 62.97 humidity 50.0 270 > th dose independent rect. 9 1
48 62.98 radiation 1.0 270 > th dose dependent rect. 9 1
50 63.00 precipitation 0.1 10 < th dose independent rect. 3 6
51 63.00 precipitation 0.1 10 < th dose dependent rect. 3 6
54 63.02 humidity 50.0 720 > th dose dependent rect. 15 13
60 63.06 humidity 90.0 720 > th dose dependent sin 16 NA
62 63.08 radiation 40.0 10 < th dose independent rect. 12 21
66 63.10 temperature 10.0 270 > th dose independent rect. 9 1
67 63.10 atmosphere 995.0 270 > th dose independent rect. 9 1
68 63.10 atmosphere 1015.0 270 < th dose independent rect. 9 1
69 63.10 humidity 90.0 720 < th dose independent rect. 20 4
70 63.10 temperature 10.0 270 > th dose independent rect. 10 23
72 63.11 precipitation 0.1 270 < th dose independent rect. 9 1
75 63.11 precipitation 0.1 270 < th dose dependent rect. 9 1
76 63.11 temperature 10.0 10 > th dose dependent rect. 9 5
78 63.12 humidity 90.0 10 < th dose independent rect. 14 19
83 63.15 wind 9.0 270 < th dose independent rect. 9 1
86 63.18 wind 5.0 270 < th dose independent rect. 23 8
87 63.18 radiation 20.0 1440 < th dose dependent rect. 12 3
103 63.27 humidity 50.0 720 > th dose dependent sin 13 NA
105 63.29 wind 5.0 90 < th dose independent rect. 3 5
107 63.30 temperature 15.0 10 > th dose independent rect. 14 19
111 63.31 radiation 10.0 1440 < th dose dependent rect. 10 6
113 63.32 wind 1.0 270 > th dose independent rect. 9 1
117 63.34 wind 5.0 10 < th dose independent rect. 3 6
118 63.34 radiation 40.0 90 < th dose independent rect. 13 19
122 63.35 humidity 90.0 720 > th dose independent rect. 20 6
128 63.38 atmosphere 1000.0 10 > th dose dependent rect. 3 6
134 63.41 radiation 1.0 10 > th dose independent rect. 9 5
149 63.49 temperature 10.0 10 > th dose independent rect. 9 5
151 63.49 atmosphere 995.0 10 > th dose independent rect. 9 5
152 63.49 atmosphere 1015.0 10 < th dose independent rect. 9 5
153 63.49 precipitation 0.1 10 < th dose independent rect. 9 5
158 63.49 precipitation 0.1 10 < th dose dependent rect. 9 5
184 63.57 radiation 30.0 90 < th dose independent rect. 3 6
191 63.60 wind 1.0 30 > th dose independent rect. 9 5
194 63.61 radiation 40.0 90 < th dose independent rect. 3 16
200 63.63 radiation 20.0 1440 < th dose dependent rect. 12 1
214 63.65 radiation 1.0 270 > th dose independent rect. 9 1
225 63.66 wind 9.0 10 < th dose independent rect. 9 5
241 63.71 wind 9.0 10 < th dose independent rect. 14 19
244 63.72 temperature 10.0 10 > th dose dependent rect. 3 6
249 63.73 radiation 1.0 270 < th dose dependent rect. 5 22
252 63.74 radiation 20.0 1440 < th dose dependent rect. 14 1
253 63.75 wind 5.0 270 < th dose independent rect. 3 2
263 63.76 temperature 10.0 1440 > th dose independent rect. 10 5
267 63.76 temperature 10.0 1440 > th dose independent rect. 15 19
312 63.87 humidity 80.0 1440 > th dose independent rect. 12 2
315 63.87 humidity 80.0 1440 > th dose dependent rect. 11 4
330 63.89 atmosphere 995.0 10 > th dose independent rect. 9 18
331 63.89 precipitation 0.1 10 < th dose independent rect. 9 18
335 63.89 precipitation 0.1 10 < th dose dependent rect. 9 18
338 63.90 temperature 10.0 10 > th dose independent rect. 3 6
340 63.90 temperature 30.0 10 < th dose independent rect. 3 6
341 63.90 humidity 50.0 10 > th dose independent rect. 3 6
343 63.90 atmosphere 995.0 10 > th dose independent rect. 3 6
344 63.90 atmosphere 1015.0 10 < th dose independent rect. 3 6
345 63.90 temperature 10.0 10 > th dose independent rect. 9 18
347 63.90 wind 9.0 10 < th dose dependent rect. 3 6
349 63.90 atmosphere 1000.0 270 > th dose dependent rect. 24 7
381 63.95 precipitation 0.1 270 < th dose independent rect. 3 2
394 63.95 precipitation 0.1 270 < th dose dependent rect. 3 2
429 64.01 humidity 50.0 30 > th dose independent rect. 9 5
460 64.04 wind 9.0 10 < th dose independent rect. 9 18
466 64.04 humidity 50.0 720 > th dose dependent rect. 15 18
477 64.06 humidity 80.0 1440 > th dose dependent rect. 12 2
486 64.07 wind 9.0 90 < th dose independent rect. 8 19
488 64.07 humidity 90.0 720 < th dose dependent rect. 20 2
529 64.13 humidity 80.0 1440 > th dose independent rect. 11 4
537 64.14 humidity 90.0 720 < th dose independent rect. 21 1
539 64.14 wind 1.0 270 > th dose independent rect. 23 8
546 64.15 atmosphere 1000.0 90 > th dose independent rect. 19 8
559 64.17 humidity 50.0 90 > th dose independent rect. 8 19
560 64.17 wind 9.0 270 < th dose independent rect. 10 22
578 64.21 radiation 10.0 1440 > th dose independent rect. 14 1
580 64.21 atmosphere 1000.0 270 > th dose independent rect. 20 15
660 64.29 radiation 10.0 1440 < th dose dependent rect. 10 17
666 64.30 atmosphere 995.0 10 > th dose independent rect. 14 19
687 64.32 radiation 10.0 1440 < th dose dependent rect. 10 12
694 64.33 atmosphere 1005.0 10 > th dose independent rect. 3 6
704 64.34 humidity 80.0 1440 < th dose independent rect. 12 2
708 64.34 atmosphere 995.0 1440 > th dose independent rect. 10 4
730 64.35 temperature 10.0 10 > th dose dependent rect. 14 19
741 64.37 wind 1.0 270 > th dose independent rect. 3 2
772 64.41 precipitation 0.1 270 < th dose independent rect. 23 8
774 64.41 precipitation 0.1 270 < th dose dependent rect. 23 8
777 64.42 precipitation 0.1 270 < th dose independent rect. 2 15
787 64.42 precipitation 0.1 270 < th dose dependent rect. 2 15
798 64.43 humidity 90.0 720 > th dose independent rect. 10 16
810 64.44 atmosphere 1015.0 10 < th dose independent rect. 9 18
836 64.46 radiation 1.0 270 < th dose independent rect. 5 22
845 64.47 atmosphere 1015.0 10 < th dose independent rect. 14 19
851 64.47 humidity 90.0 720 < th dose dependent rect. 18 14
898 64.51 radiation 1.0 270 > th dose independent rect. 10 21
920 64.53 wind 9.0 270 < th dose dependent rect. 8 2
927 64.53 humidity 90.0 10 < th dose dependent rect. 14 19
949 64.56 radiation 20.0 270 < th dose independent rect. 23 9
951 64.56 temperature 15.0 270 > th dose independent rect. 11 20
952 64.56 humidity 80.0 1440 > th dose independent rect. 11 21
996 64.59 radiation 1.0 270 < th dose independent rect. 6 20
997 64.59 humidity 50.0 270 > th dose independent rect. 5 22