Os01g0118000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fructose-bisphosphate aldolase (EC 4.1.2.13) (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os01g0118000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Fructose-bisphosphate aldolase (EC 4.1.2.13) (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.67 | 0.285 | 11.5 | 0.809 | 0.531 | -0.508 | 0.281 | -0.0711 | 0.252 | 9.88 | 20.9 | 1291 | -- | -- |
| 36.67 | 0.282 | 11.5 | 0.825 | 0.538 | -0.496 | 0.283 | -- | 0.256 | 9.87 | 21 | 1306 | -- | -- |
| 36.97 | 0.283 | 11.5 | 0.811 | 0.533 | -0.512 | -- | -0.109 | 0.25 | 9.84 | 20.91 | 1304 | -- | -- |
| 36.99 | 0.283 | 11.5 | 0.836 | 0.532 | -0.496 | -- | -- | 0.258 | 9.84 | 21.03 | 1306 | -- | -- |
| 50.45 | 0.331 | 11.5 | 0.903 | -- | -0.536 | -- | -0.0424 | 0.261 | -- | 21.4 | 850 | -- | -- |
| 43.16 | 0.308 | 11.5 | 0.615 | 0.551 | -- | 0.277 | -- | 0.129 | 10 | -- | -- | -- | -- |
| 43.46 | 0.309 | 11.5 | 0.625 | 0.55 | -- | -- | -- | 0.13 | 10 | -- | -- | -- | -- |
| 50.06 | 0.33 | 11.5 | 0.837 | -- | -0.561 | -- | -- | 0.294 | -- | 21.4 | 839 | -- | -- |
| 51.55 | 0.334 | 11.5 | -- | 0.507 | -0.224 | -- | -- | 0.121 | 9.88 | 22 | 878 | -- | -- |
| 61.66 | 0.367 | 11.6 | 0.618 | -- | -- | -- | -- | 0.129 | -- | -- | -- | -- | -- |
| 53.76 | 0.343 | 11.6 | -- | 0.548 | -- | -- | -- | 0.06 | 9.92 | -- | -- | -- | -- |
| 65.99 | 0.378 | 11.5 | -- | -- | -0.355 | -- | -- | 0.159 | -- | 21.92 | 814 | -- | -- |
| 71.75 | 0.395 | 11.6 | -- | -- | -- | -- | -- | 0.0606 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.17 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 2 | 35.39 | wind | 9 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 3 | 35.42 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 5 | 35.46 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 6 | 35.49 | wind | 9 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 7 | 35.49 | wind | 9 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 13 | 35.63 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 8 |
| 19 | 35.80 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 22 | 35.82 | wind | 9 | 14400 | > th | dose dependent | rect. | 6 | 7 |
| 26 | 35.85 | wind | 9 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 35 | 35.90 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 47 | 36.00 | temperature | 20 | 720 | > th | dose independent | sin | 5 | NA |
| 54 | 36.05 | temperature | 20 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 61 | 36.11 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 62 | 36.12 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 14 |
| 69 | 36.14 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 12 |
| 80 | 36.19 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 85 | 36.22 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 91 | 36.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 92 | 36.24 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 93 | 36.25 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 95 | 36.27 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 96 | 36.27 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 16 |
| 97 | 36.28 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 103 | 36.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 105 | 36.30 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 106 | 36.30 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 112 | 36.32 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 161 | 36.45 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 8 |
| 162 | 36.45 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 18 |
| 173 | 36.46 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 16 |
| 176 | 36.47 | temperature | 20 | 720 | < th | dose independent | sin | 5 | NA |
| 177 | 36.47 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 18 |
| 183 | 36.48 | wind | 3 | 43200 | < th | dose dependent | sin | 8 | NA |
| 215 | 36.52 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 8 |
| 217 | 36.52 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 16 |
| 237 | 36.55 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 240 | 36.56 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 249 | 36.57 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 260 | 36.58 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 267 | 36.59 | humidity | 90 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 272 | 36.60 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 275 | 36.60 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 14 |
| 289 | 36.61 | temperature | 25 | 720 | < th | dose dependent | sin | 6 | NA |
| 337 | 36.66 | wind | 3 | 43200 | < th | dose dependent | rect. | 1 | 13 |
| 339 | 36.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 14 |
| 354 | 36.68 | wind | 5 | 43200 | < th | dose dependent | rect. | 23 | 4 |
| 359 | 36.69 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 361 | 36.69 | wind | 3 | 43200 | < th | dose independent | rect. | 22 | 17 |
| 368 | 36.70 | wind | 9 | 43200 | < th | dose independent | rect. | 5 | 11 |
| 485 | 36.79 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 487 | 36.79 | wind | 9 | 43200 | > th | dose independent | rect. | 21 | 19 |
| 503 | 36.80 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 16 |
| 527 | 36.82 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 539 | 36.83 | wind | 9 | 43200 | > th | dose independent | sin | 0 | NA |
| 553 | 36.83 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 9 |
| 601 | 36.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 7 |
| 603 | 36.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 12 |
| 624 | 36.87 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 10 |
| 639 | 36.88 | wind | 9 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 742 | 36.92 | wind | 3 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 782 | 36.93 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 811 | 36.94 | wind | 9 | 43200 | < th | dose independent | rect. | 21 | 19 |
| 848 | 36.96 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 10 |
| 868 | 36.97 | wind | 9 | 43200 | < th | dose independent | sin | 0 | NA |
| 869 | 36.97 | wind | 3 | 43200 | < th | dose independent | sin | 4 | NA |
| 919 | 36.98 | temperature | 20 | 720 | < th | dose dependent | rect. | 23 | 8 |
| 969 | 37.00 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 1000 | 37.01 | humidity | 80 | 14400 | < th | dose dependent | rect. | 6 | 1 |