Os01g0114800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0114800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.61 | 0.403 | 7.74 | 2.16 | 0.361 | -1.97 | 0.0354 | 1.28 | 0.874 | 18.6 | 15.45 | 14 | -- | -- |
| 75.05 | 0.403 | 7.76 | 1.99 | 0.379 | -2.06 | 0.116 | -- | 0.83 | 18.5 | 14.44 | 18 | -- | -- |
| 73.61 | 0.4 | 7.74 | 2.16 | 0.362 | -1.96 | -- | 1.28 | 0.874 | 18.6 | 15.55 | 13 | -- | -- |
| 75.07 | 0.404 | 7.77 | 1.98 | 0.374 | -2.04 | -- | -- | 0.825 | 18.6 | 14.39 | 18 | -- | -- |
| 79.98 | 0.417 | 7.74 | 2.13 | -- | -1.85 | -- | 1.35 | 0.847 | -- | 15.09 | 11 | -- | -- |
| 114.5 | 0.502 | 7.83 | 1.58 | 0.527 | -- | -0.0217 | -- | 0.534 | 23.8 | -- | -- | -- | -- |
| 114.5 | 0.501 | 7.83 | 1.58 | 0.527 | -- | -- | -- | 0.534 | 23.8 | -- | -- | -- | -- |
| 81.52 | 0.422 | 7.76 | 1.94 | -- | -1.89 | -- | -- | 0.79 | -- | 13.6 | 9 | -- | -- |
| 168.37 | 0.608 | 7.84 | -- | 0.342 | -1.08 | -- | -- | 0.485 | 22 | -1.434 | 3 | -- | -- |
| 132.01 | 0.537 | 7.82 | 1.6 | -- | -- | -- | -- | 0.541 | -- | -- | -- | -- | -- |
| 180.53 | 0.629 | 7.87 | -- | 0.548 | -- | -- | -- | 0.358 | 24 | -- | -- | -- | -- |
| 173.89 | 0.616 | 7.83 | -- | -- | -1.08 | -- | -- | 0.51 | -- | 18.7 | 2 | -- | -- |
| 199.41 | 0.659 | 7.86 | -- | -- | -- | -- | -- | 0.364 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.78 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 3 | 72.83 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 4 | 73.03 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 6 | 73.17 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 12 | 73.44 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 13 | 73.74 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 15 | 73.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 16 | 73.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 18 | 73.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 25 | 74.11 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 28 | 74.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 34 | 74.48 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 35 | 74.58 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 36 | 74.59 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 38 | 74.77 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 39 | 74.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 40 | 74.86 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 50 | 75.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 71 | 76.02 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 78 | 76.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 79 | 76.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 84 | 76.17 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 87 | 76.18 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 98 | 76.44 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 111 | 76.79 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 118 | 76.93 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 128 | 77.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 166 | 77.72 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 171 | 77.87 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 177 | 77.98 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 195 | 78.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 213 | 78.32 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 235 | 78.61 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 244 | 78.70 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 264 | 78.93 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 290 | 79.09 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 302 | 79.20 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 21 |
| 332 | 79.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 375 | 79.68 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 9 |
| 427 | 79.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 17 |
| 459 | 80.10 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 475 | 80.15 | temperature | 15 | 1440 | > th | dose dependent | sin | 13 | NA |
| 516 | 80.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 518 | 80.23 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 615 | 80.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 727 | 80.59 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 882 | 80.82 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 968 | 80.93 | wind | 9 | 43200 | > th | dose dependent | sin | 13 | NA |