Os01g0111900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutelin family protein.
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Os01g0111900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutelin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.03 | 0.542 | 10.8 | -3.37 | 1.02 | 0.563 | 0.5 | 1.25 | -0.484 | 23.4 | 28.4 | 1227 | -- | -- |
| 133.56 | 0.538 | 10.8 | -3.55 | 0.972 | 0.711 | 0.551 | -- | -0.503 | 23.5 | 28.41 | 1200 | -- | -- |
| 133.97 | 0.539 | 10.8 | -3.37 | 1.01 | 0.575 | -- | 1.36 | -0.509 | 23.3 | 27.71 | 1224 | -- | -- |
| 134.22 | 0.54 | 10.8 | -3.66 | 1.02 | 0.722 | -- | -- | -0.542 | 23.3 | 27.8 | 1231 | -- | -- |
| 185.37 | 0.634 | 10.8 | -3.24 | -- | 1.1 | -- | 1.79 | -0.544 | -- | 25.03 | 966 | -- | -- |
| 155.47 | 0.585 | 10.8 | -3.42 | 1.12 | -- | 0.696 | -- | -0.576 | 23.6 | -- | -- | -- | -- |
| 157.53 | 0.588 | 10.8 | -3.44 | 1.12 | -- | -- | -- | -0.579 | 23.5 | -- | -- | -- | -- |
| 183.58 | 0.631 | 10.8 | -3.77 | -- | 1.32 | -- | -- | -0.699 | -- | 24.73 | 966 | -- | -- |
| 279.15 | 0.778 | 10.6 | -- | 1.15 | -2.22 | -- | -- | 0.469 | 23.5 | 7.317 | 47520 | -- | -- |
| 236.24 | 0.718 | 10.8 | -3.41 | -- | -- | -- | -- | -0.566 | -- | -- | -- | -- | -- |
| 470.04 | 1.01 | 10.7 | -- | 1.08 | -- | -- | -- | -0.195 | 23.3 | -- | -- | -- | -- |
| 362.58 | 0.887 | 10.6 | -- | -- | -2.16 | -- | -- | 0.46 | -- | 6.378 | 47520 | -- | -- |
| 543.51 | 1.09 | 10.7 | -- | -- | -- | -- | -- | -0.188 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.51 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 2 | 132.76 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 3 | 132.76 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 17 | 132.88 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 18 | 132.90 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 19 | 132.90 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 28 | 133.06 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 33 | 133.23 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 48 | 133.53 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 50 | 133.60 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 51 | 133.61 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 14 |
| 56 | 133.74 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 15 |
| 79 | 133.88 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 88 | 134.18 | temperature | 25 | 720 | > th | dose dependent | sin | 13 | NA |
| 108 | 134.59 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 110 | 134.61 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 9 |
| 113 | 134.65 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 11 |
| 118 | 134.79 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 12 |
| 123 | 134.86 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 12 |
| 125 | 134.88 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 126 | 134.88 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 145 | 134.92 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 148 | 134.93 | radiation | 30 | 1440 | < th | dose dependent | rect. | 16 | 8 |
| 167 | 135.00 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 170 | 135.01 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 184 | 135.02 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 6 |
| 186 | 135.03 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 4 |
| 202 | 135.05 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 205 | 135.06 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 228 | 135.09 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 232 | 135.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 9 |
| 237 | 135.11 | temperature | 30 | 1440 | > th | dose dependent | sin | 18 | NA |
| 315 | 135.21 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 425 | 135.22 | temperature | 30 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 432 | 135.26 | radiation | 30 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 451 | 135.28 | temperature | 30 | 720 | < th | dose independent | sin | 12 | NA |
| 468 | 135.30 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 488 | 135.33 | temperature | 30 | 1440 | > th | dose independent | sin | 14 | NA |
| 499 | 135.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 504 | 135.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 20 |
| 529 | 135.43 | temperature | 30 | 1440 | < th | dose independent | sin | 15 | NA |
| 533 | 135.44 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 539 | 135.45 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 540 | 135.45 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 546 | 135.46 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 6 |
| 587 | 135.51 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 589 | 135.51 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 610 | 135.53 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 766 | 135.68 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 770 | 135.68 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 772 | 135.69 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 777 | 135.69 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 15 |
| 856 | 135.70 | temperature | 15 | 720 | > th | dose dependent | sin | 17 | NA |
| 884 | 135.72 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 885 | 135.72 | temperature | 30 | 1440 | < th | dose independent | rect. | 12 | 23 |
| 889 | 135.73 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |