Os01g0111800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0111800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.96 | 0.534 | 8.48 | -3.49 | 0.634 | 0.899 | -0.222 | 1.74 | -0.57 | 0.758 | 20.39 | 1293 | -- | -- |
| 131.71 | 0.535 | 8.51 | -3.91 | 0.658 | 1.02 | -0.0167 | -- | -0.623 | 0.701 | 22.12 | 1267 | -- | -- |
| 129.14 | 0.529 | 8.49 | -3.52 | 0.623 | 0.915 | -- | 1.66 | -0.578 | 0.758 | 20.33 | 1260 | -- | -- |
| 130.63 | 0.532 | 8.54 | -3.98 | 0.585 | 1.01 | -- | -- | -0.675 | 0.941 | 22.47 | 1177 | -- | -- |
| 146.98 | 0.565 | 8.51 | -3.75 | -- | 1.19 | -- | 0.941 | -0.643 | -- | 22.09 | 1044 | -- | -- |
| 162.25 | 0.597 | 8.49 | -3.64 | 0.76 | -- | 0.0108 | -- | -0.483 | 0.959 | -- | -- | -- | -- |
| 162.25 | 0.597 | 8.49 | -3.64 | 0.76 | -- | -- | -- | -0.483 | 0.959 | -- | -- | -- | -- |
| 147.38 | 0.565 | 8.53 | -4 | -- | 1.27 | -- | -- | -0.706 | -- | 22.6 | 1044 | -- | -- |
| 284.07 | 0.785 | 8.24 | -- | 0.797 | -2.43 | -- | -- | 0.647 | 0.92 | 3.219 | 47520 | -- | -- |
| 198.2 | 0.658 | 8.48 | -3.61 | -- | -- | -- | -- | -0.468 | -- | -- | -- | -- | -- |
| 511.49 | 1.06 | 8.4 | -- | 0.702 | -- | -- | -- | -0.0773 | 0.737 | -- | -- | -- | -- |
| 323.64 | 0.838 | 8.23 | -- | -- | -2.38 | -- | -- | 0.644 | -- | 1.502 | 47520 | -- | -- |
| 542.3 | 1.09 | 8.39 | -- | -- | -- | -- | -- | -0.0675 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.64 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 4 | 124.86 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 13 | 126.13 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 17 | 126.29 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 18 | 126.32 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 21 | 126.40 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 25 | 126.52 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 26 | 126.59 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 19 | 3 |
| 33 | 126.73 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 36 | 126.81 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 45 | 126.95 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 62 | 127.13 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 90 | 127.50 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 14 | NA |
| 122 | 127.72 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 13 | 19 |
| 196 | 128.22 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 3 |
| 252 | 128.56 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 15 |
| 260 | 128.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 319 | 128.93 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 341 | 129.05 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 8 | 19 |
| 344 | 129.08 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 374 | 129.22 | temperature | 10.0 | 720 | > th | dose dependent | sin | 17 | NA |
| 403 | 129.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 432 | 129.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 434 | 129.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 482 | 129.60 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 485 | 129.61 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 494 | 129.64 | wind | 9.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 507 | 129.72 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 529 | 129.77 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 613 | 130.03 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 17 | 6 |
| 628 | 130.07 | temperature | 30.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 637 | 130.09 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 654 | 130.13 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 765 | 130.40 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 772 | 130.41 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 836 | 130.59 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 884 | 130.69 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 20 |
| 972 | 130.92 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 998 | 130.96 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 7 |