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Os01g0110500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.59 (0.0298) R2 : 0.587
β1 : 1.32 (0.109) R2dD : 0.138 R2D : 0.125
β2 : 1.75 (0.0777) R2dC : 0.464 R2C : 0.452
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0623 (0.0635) R2dN8 : 0.00117 R2N8 : -0.00618
σ : 0.56
deviance : 142.76
__
_____
C
peak time of C : 17.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
118.92 0.512 6.76 -0.533 1.78 1.71 -0.613 -9.65 0.139 17.5 29.6 1225 -- --
126.97 0.525 6.64 0.939 1.82 0.704 -0.254 -- -0.218 17.7 21.52 8203 -- --
119.8 0.51 6.76 -0.521 1.77 1.7 -- -9.58 0.136 17.6 29.6 1223 -- --
125.37 0.521 6.64 1.14 1.75 0.647 -- -- -0.152 17.7 28.4 8171 -- --
190.31 0.643 6.69 0.143 -- 2.33 -- -5.73 -0.368 -- 24.5 414 -- --
142.08 0.559 6.58 1.32 1.76 -- -0.544 -- 0.0648 17.7 -- -- -- --
142.76 0.56 6.59 1.32 1.75 -- -- -- 0.0623 17.8 -- -- -- --
201.83 0.662 6.6 0.934 -- 1.86 -- -- -0.177 -- 24.02 423 -- --
128.52 0.528 6.75 -- 1.74 1.21 -- -- -0.559 17.6 18.83 39859 -- --
302.43 0.813 6.56 1.27 -- -- -- -- 0.0211 -- -- -- -- --
188.78 0.643 6.62 -- 1.73 -- -- -- -0.0849 17.8 -- -- -- --
223.88 0.697 6.63 -- -- 2.02 -- -- -0.314 -- 23.71 432 -- --
344.8 0.867 6.59 -- -- -- -- -- -0.119 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 109.71 humidity 70 720 > th dose independent rect. 19 1
2 111.54 temperature 30 720 < th dose independent rect. 18 9
4 111.93 humidity 70 720 > th dose independent rect. 18 9
6 112.56 humidity 70 720 > th dose independent rect. 17 14
8 112.71 humidity 70 720 > th dose independent sin 11 NA
11 113.78 temperature 30 720 < th dose independent rect. 17 14
13 114.07 temperature 30 720 < th dose independent rect. 17 4
17 114.43 humidity 70 720 > th dose independent rect. 17 12
18 114.49 humidity 50 1440 < th dose independent rect. 16 1
20 114.67 humidity 50 1440 < th dose dependent rect. 16 1
27 115.32 humidity 70 720 > th dose independent sin 14 NA
31 115.37 temperature 30 720 > th dose dependent rect. 18 1
46 115.46 humidity 70 720 > th dose independent rect. 17 17
49 115.59 radiation 40 14400 > th dose dependent rect. 15 17
58 115.81 humidity 50 1440 > th dose independent rect. 16 1
71 116.52 wind 9 14400 > th dose independent rect. 16 1
82 116.92 radiation 40 14400 > th dose independent rect. 15 17
84 117.00 radiation 1 720 > th dose independent sin 14 NA
109 117.24 radiation 40 14400 > th dose dependent rect. 15 1
126 117.29 radiation 40 14400 > th dose independent rect. 15 1
184 117.73 radiation 1 720 < th dose independent sin 15 NA
187 117.85 temperature 30 720 < th dose independent rect. 17 16
193 118.07 radiation 40 14400 > th dose dependent rect. 8 1
212 118.17 humidity 50 720 > th dose dependent rect. 17 4
216 118.25 humidity 70 720 < th dose dependent rect. 18 2
237 118.42 humidity 50 1440 < th dose independent rect. 16 18
280 118.51 radiation 10 14400 > th dose independent rect. 5 1
295 118.52 wind 9 14400 > th dose dependent rect. 16 1
304 118.62 temperature 10 270 > th dose dependent rect. 21 9
305 118.63 humidity 50 1440 > th dose independent rect. 16 17
309 118.65 radiation 1 720 < th dose dependent sin 15 NA
313 118.67 temperature 15 270 > th dose dependent rect. 22 7
375 118.84 temperature 30 1440 < th dose independent rect. 18 18
378 118.85 radiation 1 720 < th dose dependent rect. 5 22
379 118.86 radiation 1 720 > th dose independent rect. 13 17
380 118.87 temperature 10 270 > th dose dependent rect. 11 16
387 118.98 radiation 1 720 < th dose independent rect. 13 14
435 119.06 temperature 15 720 > th dose dependent rect. 17 7
440 119.15 temperature 15 90 > th dose dependent rect. 13 16
441 119.17 radiation 20 1440 < th dose dependent rect. 18 5
449 119.24 radiation 1 720 < th dose independent rect. 10 17
452 119.26 radiation 1 720 > th dose independent rect. 11 19
455 119.27 radiation 1 720 < th dose independent rect. 17 10
469 119.28 radiation 1 720 > th dose independent rect. 13 6
486 119.31 radiation 20 14400 < th dose independent rect. 23 7
489 119.32 radiation 40 1440 > th dose dependent rect. 13 1
502 119.34 temperature 30 1440 < th dose independent sin 10 NA
510 119.38 radiation 1 720 < th dose independent rect. 14 7
517 119.40 radiation 1 720 > th dose independent rect. 10 23
520 119.42 radiation 1 720 < th dose independent rect. 10 21
528 119.45 humidity 70 720 < th dose independent sin 12 NA
534 119.48 radiation 1 720 < th dose independent rect. 5 22
551 119.50 radiation 1 720 > th dose independent rect. 11 8
573 119.56 radiation 1 720 < th dose independent rect. 13 18
600 119.67 temperature 30 1440 > th dose dependent rect. 15 21
608 119.71 humidity 70 720 > th dose independent rect. 9 15
609 119.71 temperature 15 720 > th dose dependent rect. 13 10
611 119.72 humidity 50 4320 < th dose independent rect. 16 22
618 119.76 temperature 30 720 < th dose independent sin 12 NA
642 119.83 humidity 70 720 > th dose independent rect. 9 13
658 119.84 temperature 30 1440 > th dose dependent sin 11 NA
659 119.85 temperature 30 720 > th dose independent rect. 18 1
680 119.87 radiation 1 720 > th dose independent rect. 7 23
683 119.88 temperature 30 1440 > th dose independent rect. 18 18
685 119.89 radiation 1 720 > th dose independent rect. 17 22
687 119.90 radiation 1 720 < th dose independent rect. 22 23
690 119.91 temperature 15 720 > th dose dependent rect. 13 12
717 119.96 temperature 30 1440 < th dose independent rect. 9 3
726 119.98 radiation 1 720 < th dose dependent rect. 10 21
742 120.03 temperature 15 90 > th dose dependent rect. 3 2
744 120.04 radiation 1 720 > th dose dependent rect. 18 1
756 120.05 temperature 20 90 > th dose independent rect. 3 2
758 120.05 radiation 1 720 < th dose dependent rect. 13 18
780 120.09 temperature 30 1440 > th dose dependent rect. 15 4
808 120.10 temperature 30 1440 < th dose independent rect. 20 16
825 120.16 temperature 30 1440 > th dose independent rect. 9 3
839 120.16 radiation 1 720 < th dose dependent rect. 13 14
851 120.20 wind 5 43200 > th dose dependent rect. 12 1
872 120.23 temperature 15 720 > th dose dependent sin 16 NA
878 120.24 radiation 1 720 < th dose dependent rect. 22 23
918 120.30 radiation 40 1440 > th dose dependent rect. 13 20
940 120.33 radiation 1 720 > th dose independent rect. 5 14
962 120.37 radiation 1 720 < th dose independent rect. 10 11
963 120.37 radiation 40 1440 > th dose dependent rect. 13 3
988 120.40 radiation 1 720 > th dose independent no NA NA