FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0108700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.98 (0.0379) R2 : 0.0148
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.209 (0.0797) R2dN8 : 0.0191 R2N8 : 0.0148
σ : 0.713
deviance : 233.5
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
222.08 0.7 3.12 -0.632 0.098 15.8 0.505 -41.3 -0.224 12.7 49.51 11 -- --
229.96 0.706 2.99 -0.259 0.121 -0.103 0.511 -- -0.236 13.8 42.31 3 -- --
222.69 0.695 3.11 -0.599 0.105 16.2 -- -41.8 -0.231 12.4 49.28 11 -- --
230.2 0.711 2.98 -0.252 0.0826 0.324 -- -- -0.219 14.4 62 4 -- --
220 0.691 3.29 -1.08 -- 39.7 -- -103 -0.221 -- 49 11 -- --
229.99 0.711 2.99 -0.259 0.118 -- 0.515 -- -0.236 13.8 -- -- -- --
231.01 0.712 2.99 -0.243 0.122 -- -- -- -0.233 14.4 -- -- -- --
230.56 0.71 2.98 -0.257 -- 0.393 -- -- -0.217 -- 62 4 -- --
231.86 0.713 2.98 -- 0.0903 0.301 -- -- -0.192 14.4 62 4 -- --
231.88 0.712 2.99 -0.248 -- -- -- -- -0.236 -- -- -- -- --
232.56 0.713 2.98 -- 0.126 -- -- -- -0.206 14.4 -- -- -- --
232.29 0.712 2.98 -- -- 0.364 -- -- -0.189 -- 62.83 4 -- --
233.5 0.713 2.98 -- -- -- -- -- -0.209 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 213.61 radiation 10 10 > th dose dependent rect. 17 14
2 214.37 humidity 80 10 < th dose dependent rect. 18 3
6 215.04 radiation 10 10 > th dose dependent rect. 17 1
27 216.78 radiation 1 90 > th dose dependent rect. 18 1
37 217.04 wind 3 30 > th dose independent rect. 19 1
39 217.09 radiation 10 10 > th dose independent rect. 17 14
40 217.41 radiation 20 270 > th dose dependent rect. 16 1
57 217.50 humidity 80 10 < th dose independent rect. 19 1
59 217.57 humidity 90 10 < th dose dependent rect. 2 3
62 217.64 humidity 60 270 < th dose independent rect. 15 4
81 217.81 humidity 90 30 < th dose independent rect. 2 3
99 218.31 humidity 70 270 < th dose dependent rect. 16 1
105 218.40 humidity 80 90 < th dose dependent rect. 1 4
113 218.43 radiation 10 10 > th dose independent rect. 17 1
137 218.72 humidity 50 10 < th dose dependent rect. 17 21
149 218.86 humidity 50 720 > th dose dependent rect. 8 1
178 219.22 wind 3 90 > th dose dependent rect. 18 2
184 219.25 radiation 1 720 < th dose dependent rect. 22 9
187 219.34 temperature 20 10 > th dose independent rect. 19 1
204 219.52 humidity 50 10 < th dose independent rect. 17 21
209 219.59 humidity 60 270 < th dose independent sin 13 NA
210 219.59 humidity 50 43200 < th dose independent rect. 4 1
222 219.69 humidity 60 270 < th dose dependent rect. 16 3
225 219.72 radiation 1 90 > th dose independent rect. 18 1
242 219.80 humidity 90 720 < th dose independent rect. 6 2
277 219.91 atmosphere 1005 90 < th dose independent rect. 8 1
281 219.97 humidity 50 43200 > th dose independent rect. 4 1
283 219.98 humidity 70 43200 < th dose dependent rect. 5 1
284 219.98 radiation 40 4320 > th dose dependent rect. 15 17
285 220.01 temperature 25 30 < th dose independent rect. 18 2
294 220.05 humidity 60 270 > th dose independent sin 13 NA
312 220.16 atmosphere 1005 90 < th dose independent rect. 8 12
319 220.21 radiation 1 720 < th dose independent rect. 22 9
322 220.23 humidity 50 10 < th dose dependent rect. 17 1
347 220.40 humidity 50 43200 > th dose independent rect. 4 3
411 220.67 radiation 1 1440 < th dose dependent rect. 6 1
417 220.73 atmosphere 1005 720 < th dose independent rect. 8 1
438 220.83 radiation 1 720 > th dose independent rect. 6 1
441 220.85 radiation 1 720 > th dose independent rect. 4 3
476 221.01 radiation 40 4320 < th dose independent rect. 15 4
490 221.06 humidity 50 43200 > th dose independent rect. 2 5
491 221.08 humidity 50 10 < th dose independent rect. 17 1
492 221.08 atmosphere 1005 14400 < th dose independent rect. 22 1
512 221.09 radiation 40 4320 < th dose independent rect. 15 13
513 221.10 radiation 1 720 > th dose independent rect. 17 15
523 221.14 atmosphere 1005 90 < th dose independent rect. 14 6
524 221.15 humidity 50 43200 > th dose independent rect. 22 9
529 221.17 radiation 40 4320 < th dose independent rect. 15 16
530 221.19 atmosphere 1005 10 < th dose independent rect. 9 1
538 221.20 humidity 90 1440 > th dose dependent rect. 7 1
578 221.35 wind 1 1440 < th dose dependent rect. 15 1
579 221.37 atmosphere 1005 14400 > th dose independent rect. 23 1
581 221.37 atmosphere 1005 10 > th dose dependent rect. 15 4
591 221.42 atmosphere 1005 90 < th dose independent rect. 18 1
601 221.46 humidity 50 10 < th dose dependent sin 9 NA
605 221.48 radiation 40 4320 < th dose independent rect. 15 8
607 221.50 atmosphere 1000 10 > th dose independent rect. 20 23
727 221.75 atmosphere 1005 90 < th dose independent rect. 17 3
731 221.77 temperature 25 270 < th dose independent rect. 14 1
738 221.81 humidity 80 720 > th dose independent rect. 8 1
751 221.85 humidity 50 30 > th dose independent rect. 20 23
757 221.87 atmosphere 1005 270 < th dose independent rect. 12 8
777 221.96 temperature 15 14400 > th dose independent rect. 14 2
803 222.05 wind 7 10 < th dose independent rect. 19 1
811 222.08 temperature 10 43200 > th dose independent rect. 8 8
814 222.10 atmosphere 1005 90 > th dose dependent rect. 3 1
826 222.12 atmosphere 1010 10 < th dose dependent rect. 18 2
832 222.14 temperature 10 43200 > th dose independent rect. 13 10
855 222.18 temperature 10 43200 > th dose independent rect. 20 2
859 222.19 atmosphere 1005 270 < th dose independent rect. 15 3
861 222.19 radiation 20 90 < th dose independent rect. 20 14
862 222.20 atmosphere 1005 1440 > th dose independent rect. 8 1
863 222.20 atmosphere 1005 1440 > th dose independent rect. 7 3
864 222.20 temperature 10 43200 > th dose independent rect. 20 4
916 222.27 temperature 10 43200 > th dose independent rect. 10 14
917 222.27 atmosphere 1005 10 > th dose dependent rect. 3 2
918 222.28 temperature 10 43200 < th dose independent rect. 21 1
920 222.28 temperature 10 43200 < th dose independent rect. 19 4
923 222.28 temperature 25 90 < th dose independent rect. 14 6
933 222.28 temperature 10 43200 < th dose independent rect. 9 15
934 222.28 temperature 10 43200 > th dose independent rect. 8 16
936 222.29 temperature 10 43200 > th dose independent rect. 23 1
937 222.29 temperature 15 14400 < th dose independent rect. 15 1
956 222.29 radiation 1 1440 < th dose dependent rect. 18 13
957 222.29 temperature 10 43200 < th dose dependent rect. 8 14
977 222.32 temperature 15 14400 < th dose dependent rect. 16 1
992 222.33 temperature 10 43200 < th dose dependent rect. 20 2