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Os01g0106500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.12 (0.0261) R2 : 0.73
β1 : 1.62 (0.0957) R2dD : 0.177 R2D : 0.13
β2 : 1.12 (0.0833) R2dC : 0.168 R2C : 0.373
β3 : -1.28 (0.0876) R2dE : 0.202 R2E : 0.396
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.296 (0.056) R2dN8 : 0.0226 R2N8 : -0.0167
σ : 0.488
deviance : 109.74
__
_____
C
peak time of C : 16.1
E
wheather : wind
threshold : 7.332
memory length : 78
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.46
open length of G : 5.23

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
109.71 0.492 9.12 1.61 1.09 -1.3 -0.305 -0.171 0.289 16 7.419 89 3.32 5.2
109.67 0.488 9.12 1.64 1.09 -1.3 -0.31 -- 0.285 16 7.428 81 3.38 5.26
109.79 0.488 9.12 1.62 1.1 -1.29 -- 0.000747 0.296 16 7.407 81 3.4 5.22
109.74 0.488 9.12 1.62 1.12 -1.28 -- -- 0.296 16.1 7.332 78 3.46 5.23
147.93 0.566 9.12 1.66 -- -1.88 -- 0.174 0.301 -- 9.447 59 3.34 5.32
150.21 0.575 9.16 1.55 1.94 -- 0.322 -- 0.22 16.9 -- -- -- --
150.47 0.574 9.16 1.55 1.94 -- -- -- 0.221 16.9 -- -- -- --
147.79 0.566 9.12 1.63 -- -1.89 -- -- 0.283 -- 9.367 61 3.31 5.35
178.43 0.622 9.16 -- 1.14 -1.14 -- -- 0.128 16.1 11.84 74 3.56 5.21
348.52 0.872 9.14 1.48 -- -- -- -- 0.171 -- -- -- -- --
213.9 0.684 9.2 -- 1.91 -- -- -- 0.0484 16.9 -- -- -- --
217.17 0.686 9.15 -- -- -1.75 -- -- 0.115 -- 13.19 64 3.28 5.46
406.31 0.941 9.18 -- -- -- -- -- 0.00709 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 111.77 wind 5.0 270 < th dose independent rect. 3 2
2 111.85 wind 7.0 90 < th dose dependent rect. 3 5
3 111.97 temperature 10.0 270 > th dose dependent rect. 3 3
4 112.00 precipitation 0.1 270 < th dose independent rect. 3 2
5 112.00 precipitation 0.1 270 < th dose dependent rect. 3 2
8 112.19 temperature 10.0 90 > th dose dependent rect. 3 5
10 112.55 wind 5.0 90 < th dose independent rect. 3 5
11 112.55 wind 9.0 270 < th dose dependent rect. 3 2
16 112.69 temperature 15.0 270 > th dose independent rect. 13 17
20 113.01 humidity 50.0 270 > th dose dependent rect. 3 2
23 113.13 temperature 10.0 270 > th dose independent rect. 3 2
25 113.13 temperature 30.0 270 < th dose independent rect. 3 2
26 113.13 humidity 50.0 270 > th dose independent rect. 3 2
29 113.13 atmosphere 995.0 270 > th dose independent rect. 3 2
30 113.13 atmosphere 1010.0 270 < th dose independent rect. 3 2
32 113.13 radiation 20.0 270 < th dose independent rect. 3 2
35 113.13 temperature 10.0 270 > th dose independent rect. 5 22
37 113.15 radiation 30.0 270 < th dose dependent rect. 3 2
40 113.19 radiation 1.0 270 < th dose independent rect. 3 2
50 113.38 temperature 10.0 270 > th dose dependent rect. 1 6
54 113.51 wind 9.0 270 < th dose independent rect. 5 22
55 113.57 precipitation 0.1 90 < th dose independent rect. 3 5
56 113.57 precipitation 0.1 90 < th dose dependent rect. 3 5
70 114.26 temperature 15.0 10 > th dose independent rect. 14 19
77 114.35 temperature 10.0 90 > th dose independent rect. 3 5
79 114.35 temperature 30.0 90 < th dose independent rect. 3 5
80 114.35 humidity 50.0 90 > th dose independent rect. 3 5
82 114.35 atmosphere 995.0 90 > th dose independent rect. 3 5
83 114.35 atmosphere 1015.0 90 < th dose independent rect. 3 5
84 114.35 temperature 10.0 90 > th dose independent rect. 8 19
86 114.37 radiation 40.0 90 < th dose independent rect. 3 5
89 114.58 temperature 10.0 10 > th dose dependent rect. 4 5
98 114.70 temperature 15.0 270 > th dose independent rect. 10 21
100 114.76 radiation 10.0 270 < th dose independent rect. 2 4
101 114.78 wind 5.0 270 < th dose independent rect. 1 6
112 114.98 precipitation 0.1 10 < th dose independent rect. 4 5
113 114.98 precipitation 0.1 10 < th dose dependent rect. 4 5
158 115.20 wind 9.0 90 < th dose independent rect. 8 19
159 115.20 temperature 10.0 270 > th dose independent rect. 6 20
160 115.21 wind 9.0 270 < th dose independent rect. 6 20
165 115.26 atmosphere 995.0 270 > th dose dependent rect. 17 9
170 115.36 atmosphere 995.0 90 > th dose independent rect. 8 19
174 115.38 precipitation 0.1 270 < th dose independent rect. 13 17
176 115.38 precipitation 0.1 270 < th dose dependent rect. 13 17
195 115.44 wind 9.0 270 < th dose dependent rect. 1 6
200 115.48 atmosphere 1000.0 270 > th dose independent rect. 18 8
213 115.67 temperature 10.0 10 > th dose dependent rect. 14 19
226 115.81 atmosphere 1010.0 270 < th dose independent rect. 13 17
249 115.92 temperature 10.0 90 > th dose dependent rect. 14 18
252 115.93 precipitation 0.1 270 < th dose independent rect. 1 6
254 115.93 precipitation 0.1 270 < th dose dependent rect. 1 6
257 115.95 humidity 50.0 270 > th dose independent rect. 6 7
263 116.05 precipitation 0.1 90 < th dose independent rect. 8 19
264 116.05 precipitation 0.1 90 < th dose dependent rect. 8 19
266 116.08 atmosphere 995.0 30 > th dose dependent rect. 9 19
268 116.11 temperature 15.0 270 > th dose independent rect. 2 15
274 116.20 humidity 50.0 30 > th dose dependent rect. 4 5
276 116.21 temperature 10.0 270 > th dose independent rect. 6 7
277 116.21 atmosphere 995.0 270 > th dose independent rect. 6 7
278 116.21 atmosphere 1015.0 270 < th dose independent rect. 6 7
281 116.23 temperature 10.0 270 > th dose dependent rect. 12 19
283 116.26 radiation 20.0 270 < th dose dependent rect. 1 7
286 116.29 atmosphere 995.0 270 > th dose independent rect. 6 20
288 116.32 precipitation 0.1 270 < th dose independent rect. 6 7
289 116.32 precipitation 0.1 270 < th dose dependent rect. 6 7
294 116.39 temperature 15.0 270 > th dose independent rect. 11 10
310 116.58 humidity 70.0 270 > th dose independent rect. 1 6
324 116.76 temperature 10.0 270 > th dose independent rect. 1 6
326 116.76 temperature 30.0 270 < th dose independent rect. 1 6
327 116.76 humidity 50.0 270 > th dose independent rect. 1 6
329 116.76 atmosphere 995.0 270 > th dose independent rect. 1 6
330 116.76 atmosphere 1015.0 270 < th dose independent rect. 1 6
336 116.82 atmosphere 1010.0 270 < th dose independent rect. 11 10
338 116.83 wind 9.0 270 < th dose independent rect. 6 7
347 116.87 wind 7.0 270 < th dose independent rect. 17 9
361 116.94 radiation 40.0 90 < th dose independent rect. 13 19
365 117.00 precipitation 0.1 90 < th dose independent rect. 8 7
366 117.00 precipitation 0.1 90 < th dose dependent rect. 8 7
372 117.05 wind 9.0 270 < th dose independent rect. 13 17
377 117.13 temperature 10.0 90 > th dose independent rect. 8 7
378 117.13 atmosphere 1015.0 90 < th dose independent rect. 8 7
380 117.13 atmosphere 995.0 270 > th dose independent rect. 5 22
381 117.13 humidity 50.0 270 > th dose dependent rect. 1 6
384 117.17 atmosphere 995.0 90 > th dose independent rect. 8 7
388 117.22 precipitation 0.1 270 < th dose independent rect. 2 15
389 117.22 precipitation 0.1 270 < th dose dependent rect. 2 15
435 117.42 humidity 50.0 90 > th dose independent rect. 8 19
468 117.54 radiation 10.0 270 < th dose independent rect. 17 9
474 117.57 wind 1.0 90 > th dose independent rect. 8 7
477 117.59 wind 9.0 90 < th dose independent rect. 15 17
478 117.59 precipitation 0.1 10 < th dose independent rect. 14 19
479 117.59 precipitation 0.1 10 < th dose dependent rect. 14 19
481 117.60 precipitation 0.1 270 < th dose independent rect. 10 22
482 117.60 precipitation 0.1 270 < th dose dependent rect. 10 22
488 117.65 precipitation 0.1 270 < th dose independent rect. 6 20
490 117.65 precipitation 0.1 270 < th dose dependent rect. 6 20
497 117.70 radiation 1.0 90 > th dose independent rect. 8 6
500 117.74 radiation 20.0 270 < th dose dependent rect. 17 9
502 117.77 atmosphere 1015.0 90 < th dose dependent rect. 15 17
505 117.81 radiation 1.0 10 > th dose independent rect. 9 5
519 117.88 humidity 50.0 270 > th dose independent rect. 9 1
522 117.90 humidity 50.0 90 > th dose independent rect. 8 6
531 117.95 precipitation 0.1 270 < th dose independent rect. 5 22
533 117.95 precipitation 0.1 270 < th dose dependent rect. 5 22
567 118.09 temperature 10.0 10 > th dose independent rect. 9 5
569 118.09 atmosphere 995.0 10 > th dose independent rect. 9 5
570 118.09 atmosphere 1015.0 10 < th dose independent rect. 9 5
571 118.09 precipitation 0.1 10 < th dose independent rect. 9 5
575 118.09 precipitation 0.1 10 < th dose dependent rect. 9 5
577 118.10 temperature 10.0 270 > th dose independent rect. 9 1
578 118.10 atmosphere 995.0 270 > th dose independent rect. 9 1
579 118.10 atmosphere 1015.0 270 < th dose independent rect. 9 1
594 118.21 atmosphere 1015.0 270 < th dose dependent rect. 13 17
617 118.26 humidity 50.0 270 > th dose independent rect. 6 20
622 118.30 wind 9.0 270 < th dose independent rect. 9 1
629 118.35 precipitation 0.1 270 < th dose independent rect. 9 1
630 118.35 radiation 40.0 10 < th dose independent rect. 14 19
631 118.35 precipitation 0.1 270 < th dose dependent rect. 9 1
633 118.36 temperature 10.0 270 > th dose independent rect. 17 9
638 118.36 atmosphere 1015.0 270 < th dose independent rect. 2 15
643 118.40 humidity 50.0 270 > th dose independent rect. 17 9
662 118.48 precipitation 0.1 270 < th dose independent rect. 11 20
663 118.48 precipitation 0.1 270 < th dose dependent rect. 11 20
669 118.52 wind 9.0 90 < th dose independent rect. 8 7
682 118.57 wind 9.0 270 < th dose independent rect. 2 15
683 118.57 temperature 15.0 10 > th dose independent rect. 12 21
754 118.77 atmosphere 995.0 90 > th dose dependent rect. 3 5
764 118.80 humidity 50.0 270 > th dose dependent rect. 17 9
766 118.81 wind 9.0 10 < th dose independent rect. 14 19
799 118.97 atmosphere 995.0 270 > th dose dependent rect. 3 2
802 118.99 humidity 50.0 270 > th dose independent rect. 7 4
815 119.09 temperature 10.0 1440 > th dose independent rect. 10 5
818 119.09 temperature 10.0 1440 > th dose independent rect. 15 19
824 119.10 wind 1.0 270 > th dose independent rect. 9 1
848 119.22 atmosphere 1015.0 10 < th dose independent rect. 14 19
854 119.27 temperature 10.0 270 > th dose independent rect. 7 4
855 119.27 atmosphere 995.0 270 > th dose independent rect. 7 4
856 119.27 atmosphere 1015.0 270 < th dose independent rect. 7 4
859 119.27 atmosphere 1015.0 270 < th dose dependent rect. 3 2
873 119.31 atmosphere 995.0 90 > th dose independent rect. 15 17
890 119.34 atmosphere 995.0 10 > th dose dependent rect. 4 5
904 119.39 precipitation 0.1 270 < th dose independent rect. 7 4
906 119.39 precipitation 0.1 270 < th dose dependent rect. 7 4
917 119.44 radiation 40.0 10 < th dose independent rect. 12 21
940 119.56 wind 9.0 270 < th dose independent rect. 7 4
970 119.64 wind 9.0 10 < th dose independent rect. 9 5
984 119.68 temperature 30.0 270 < th dose independent rect. 17 9
994 119.73 wind 1.0 270 > th dose independent rect. 6 7