Os01g0104500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os01g0104500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 290.06 | 0.8 | 3.25 | -0.259 | 0.17 | 4.43 | 0.147 | -10.2 | -0.056 | 8.44 | -0.03303 | 1233 | -- | -- |
| 306.57 | 0.815 | 3.16 | 0.0992 | 0.043 | 1.38 | 0.614 | -- | -0.108 | 14.1 | -3.407 | 568 | -- | -- |
| 290.11 | 0.793 | 3.25 | -0.254 | 0.172 | 4.42 | -- | -10.2 | -0.0566 | 8.04 | -0.02756 | 1232 | -- | -- |
| 296.97 | 0.803 | 3.16 | 0.0348 | 0.00737 | 1.62 | -- | -- | -0.0795 | 14 | -4.402 | 1231 | -- | -- |
| 291.7 | 0.795 | 3.26 | -0.267 | -- | 4.44 | -- | -10.3 | -0.0642 | -- | 0.08702 | 1232 | -- | -- |
| 316.79 | 0.834 | 3.17 | 0.26 | 0.166 | -- | 0.108 | -- | -0.149 | 7.86 | -- | -- | -- | -- |
| 316.81 | 0.834 | 3.17 | 0.263 | 0.167 | -- | -- | -- | -0.149 | 7.6 | -- | -- | -- | -- |
| 296.94 | 0.803 | 3.16 | -0.00375 | -- | 1.63 | -- | -- | -0.0893 | -- | -4.329 | 1232 | -- | -- |
| 295.7 | 0.801 | 3.16 | -- | 0.139 | 1.51 | -- | -- | -0.12 | 7.97 | -3.723 | 1235 | -- | -- |
| 318.31 | 0.834 | 3.17 | 0.265 | -- | -- | -- | -- | -0.147 | -- | -- | -- | -- | -- |
| 318.63 | 0.835 | 3.17 | -- | 0.169 | -- | -- | -- | -0.179 | 7.49 | -- | -- | -- | -- |
| 296.94 | 0.803 | 3.16 | -- | -- | 1.63 | -- | -- | -0.0878 | -- | -3.937 | 1232 | -- | -- |
| 320.16 | 0.835 | 3.18 | -- | -- | -- | -- | -- | -0.176 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 287.10 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 2 | 287.70 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 3 | 287.89 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 17 | 288.48 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 23 | 289.18 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 17 | 3 |
| 24 | 289.18 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 15 | 5 |
| 48 | 289.24 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 52 | 289.27 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 60 | 289.32 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 86 | 289.52 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 15 |
| 87 | 289.52 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 15 |
| 152 | 290.17 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 15 |
| 162 | 290.50 | humidity | 70.0 | 4320 | < th | dose dependent | sin | 14 | NA |
| 165 | 290.56 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 18 |
| 166 | 290.56 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 18 |
| 212 | 290.82 | precipitation | 0.1 | 1440 | > th | dose dependent | sin | 1 | NA |
| 237 | 290.96 | humidity | 60.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 239 | 290.97 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 279 | 291.20 | precipitation | 0.1 | 1440 | < th | dose independent | sin | 0 | NA |
| 280 | 291.20 | precipitation | 0.1 | 1440 | < th | dose dependent | sin | 0 | NA |
| 287 | 291.27 | precipitation | 0.1 | 1440 | > th | dose independent | sin | 0 | NA |
| 301 | 291.29 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 310 | 291.34 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 388 | 291.65 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 8 |
| 454 | 291.82 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 2 | 17 |
| 457 | 291.82 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 9 | 22 |
| 463 | 291.84 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 513 | 291.89 | precipitation | 0.1 | 1440 | > th | dose dependent | no | NA | NA |
| 515 | 291.89 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 23 |
| 537 | 291.92 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 19 | 23 |
| 554 | 291.97 | humidity | 70.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 561 | 291.97 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 580 | 292.01 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 20 |
| 620 | 292.12 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 9 | 14 |
| 627 | 292.13 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 686 | 292.21 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 689 | 292.21 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 696 | 292.24 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 720 | 292.28 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 13 | 18 |
| 722 | 292.28 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 13 | 18 |
| 752 | 292.33 | precipitation | 0.1 | 1440 | < th | dose independent | sin | 16 | NA |
| 755 | 292.33 | precipitation | 0.1 | 1440 | < th | dose dependent | sin | 16 | NA |
| 757 | 292.34 | precipitation | 0.1 | 1440 | > th | dose independent | sin | 16 | NA |
| 763 | 292.36 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 765 | 292.36 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 767 | 292.36 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 13 | 10 |
| 770 | 292.37 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 788 | 292.39 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 811 | 292.44 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 17 |
| 816 | 292.45 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 8 |
| 914 | 292.60 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 18 |
| 920 | 292.61 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 15 | 18 |
| 931 | 292.63 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 981 | 292.71 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 9 | 11 |