Os01g0101200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 2,3-diketo-5-methylthio-1-phosphopentane phosphatase domain containing protein.
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Os01g0101200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 2,3-diketo-5-methylthio-1-phosphopentane phosphatase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 217.07 | 0.692 | 11.6 | -3.34 | 1.43 | -0.723 | 1.69 | -1.91 | -0.795 | 23.5 | 1002 | 15 | -- | -- |
| 220.17 | 0.691 | 11.6 | -3.38 | 1.42 | -0.879 | 1.64 | -- | -0.765 | 23.5 | 1002 | 43 | -- | -- |
| 227.74 | 0.708 | 11.6 | -3.43 | 1.42 | -0.807 | -- | -1.16 | -0.786 | 23.4 | 1002 | 4 | -- | -- |
| 230.05 | 0.711 | 11.6 | -3.47 | 1.43 | -0.898 | -- | -- | -0.778 | 23.5 | 1002 | 4 | -- | -- |
| 353.71 | 0.881 | 11.6 | -3.38 | -- | -0.736 | -- | -1.48 | -0.78 | -- | 1002 | 4 | -- | -- |
| 251.82 | 0.744 | 11.6 | -3.31 | 1.41 | -- | 1.67 | -- | -0.883 | 23.4 | -- | -- | -- | -- |
| 263.7 | 0.76 | 11.6 | -3.37 | 1.41 | -- | -- | -- | -0.889 | 23.3 | -- | -- | -- | -- |
| 357.52 | 0.884 | 11.6 | -3.43 | -- | -0.851 | -- | -- | -0.769 | -- | 1002 | 4 | -- | -- |
| 544.29 | 1.09 | 11.5 | -- | 1.4 | -0.656 | -- | -- | -0.417 | 23.2 | 1003 | 7 | -- | -- |
| 387.89 | 0.92 | 11.6 | -3.34 | -- | -- | -- | -- | -0.876 | -- | -- | -- | -- | -- |
| 563.63 | 1.11 | 11.5 | -- | 1.38 | -- | -- | -- | -0.513 | 23.2 | -- | -- | -- | -- |
| 665.02 | 1.2 | 11.5 | -- | -- | -0.607 | -- | -- | -0.421 | -- | 1003 | 85 | -- | -- |
| 681.76 | 1.22 | 11.5 | -- | -- | -- | -- | -- | -0.505 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 197.43 | humidity | 80 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 197.72 | humidity | 80 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 12 | 198.54 | wind | 1 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 14 | 198.56 | humidity | 80 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 45 | 199.80 | humidity | 80 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 52 | 200.07 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 61 | 201.01 | humidity | 80 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 62 | 201.01 | humidity | 80 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 63 | 201.11 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 77 | 201.95 | wind | 1 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 94 | 202.85 | humidity | 80 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 107 | 203.32 | humidity | 80 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 114 | 203.43 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 121 | 203.52 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 123 | 203.54 | humidity | 80 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 127 | 203.57 | humidity | 80 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 176 | 204.81 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 20 |
| 187 | 205.36 | humidity | 70 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 188 | 205.39 | wind | 1 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 203 | 205.90 | wind | 9 | 14400 | > th | dose dependent | rect. | 20 | 18 |
| 220 | 206.61 | wind | 1 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 221 | 206.75 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 238 | 207.66 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 256 | 208.39 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 18 |
| 262 | 208.53 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 266 | 208.61 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 267 | 208.73 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 20 |
| 273 | 208.82 | wind | 9 | 14400 | < th | dose independent | rect. | 3 | 13 |
| 300 | 209.44 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 308 | 209.58 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 309 | 209.59 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 12 |
| 314 | 209.63 | wind | 9 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 342 | 209.97 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 352 | 210.07 | wind | 9 | 14400 | > th | dose dependent | sin | 1 | NA |
| 362 | 210.15 | wind | 7 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 385 | 210.43 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 20 |
| 400 | 210.64 | wind | 9 | 14400 | > th | dose dependent | rect. | 3 | 15 |
| 402 | 210.66 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 403 | 210.68 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 444 | 211.06 | wind | 9 | 14400 | > th | dose independent | sin | 2 | NA |
| 454 | 211.19 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 464 | 211.34 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 512 | 211.75 | wind | 9 | 14400 | < th | dose independent | sin | 2 | NA |
| 518 | 211.77 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 14 |
| 553 | 212.10 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 14 |
| 593 | 212.53 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 640 | 212.88 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 664 | 213.10 | wind | 9 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 682 | 213.23 | wind | 9 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 689 | 213.30 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 20 |
| 789 | 214.12 | wind | 9 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 832 | 214.39 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 847 | 214.49 | wind | 9 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 858 | 214.63 | humidity | 80 | 43200 | > th | dose independent | rect. | 16 | 8 |
| 901 | 214.84 | wind | 9 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 911 | 214.88 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 9 |
| 914 | 214.89 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 930 | 214.94 | wind | 9 | 14400 | > th | dose dependent | no | NA | NA |
| 953 | 215.04 | wind | 9 | 14400 | > th | dose independent | rect. | 12 | 20 |
| 980 | 215.14 | wind | 9 | 14400 | > th | dose independent | no | NA | NA |