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Os01g0100500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Pectinesterase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.00907) R2 : 0.0108
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0425 (0.0191) R2dN8 : 0.0139 R2N8 : 0.0108
σ : 0.171
deviance : 13.39
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.3 0.158 11.5 0.145 0.075 -0.231 -0.102 0.0156 0.122 14 10.01 1432 -- --
11.31 0.157 11.5 0.144 0.0752 -0.23 -0.104 -- 0.121 14 10.01 1429 -- --
11.34 0.157 11.5 0.144 0.0751 -0.232 -- 0.029 0.122 14 10.02 1429 -- --
11.34 0.157 11.5 0.144 0.0752 -0.231 -- -- 0.121 14 10.01 1419 -- --
11.49 0.158 11.5 0.146 -- -0.231 -- 0.106 0.12 -- 11.67 1320 -- --
12.81 0.168 11.5 0.0683 0.0876 -- -0.0552 -- 0.0519 13.9 -- -- -- --
12.83 0.168 11.5 0.0666 0.0875 -- -- -- 0.0515 13.9 -- -- -- --
11.5 0.158 11.5 0.13 -- -0.237 -- -- 0.117 -- 11.67 1322 -- --
11.69 0.159 11.5 -- 0.0633 -0.193 -- -- 0.0873 13.7 16.74 1368 -- --
13.29 0.17 11.5 0.063 -- -- -- -- 0.0495 -- -- -- -- --
12.94 0.168 11.5 -- 0.0862 -- -- -- 0.0441 13.9 -- -- -- --
11.81 0.16 11.5 -- -- -0.201 -- -- 0.0924 -- 16.86 1313 -- --
13.39 0.171 11.5 -- -- -- -- -- 0.0425 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 10.12 wind 3.0 43200 < th dose dependent rect. 1 4
20 10.53 wind 3.0 43200 < th dose independent rect. 3 2
21 10.53 wind 3.0 43200 < th dose independent rect. 3 6
23 10.54 wind 3.0 43200 < th dose independent rect. 8 1
27 10.55 wind 3.0 43200 > th dose independent rect. 3 6
34 10.57 wind 3.0 43200 > th dose independent rect. 8 1
41 10.58 wind 3.0 43200 > th dose independent rect. 3 3
42 10.58 humidity 80.0 43200 > th dose independent rect. 24 18
48 10.59 wind 3.0 43200 > th dose independent rect. 3 1
52 10.59 wind 9.0 14400 > th dose dependent rect. 10 1
57 10.60 wind 3.0 43200 > th dose dependent rect. 11 2
61 10.61 humidity 80.0 43200 > th dose independent rect. 1 16
78 10.64 humidity 80.0 43200 > th dose independent rect. 2 14
89 10.65 wind 1.0 43200 > th dose dependent rect. 3 6
95 10.66 radiation 10.0 1440 > th dose independent rect. 12 1
97 10.66 wind 3.0 43200 < th dose independent rect. 24 9
105 10.67 humidity 80.0 43200 > th dose independent sin 3 NA
106 10.67 wind 5.0 43200 < th dose independent rect. 11 2
111 10.67 humidity 80.0 43200 < th dose independent rect. 24 17
120 10.67 humidity 70.0 43200 > th dose dependent rect. 13 13
127 10.68 humidity 80.0 43200 > th dose independent rect. 3 12
131 10.68 wind 5.0 43200 < th dose dependent rect. 8 1
147 10.70 wind 5.0 43200 > th dose independent rect. 11 2
153 10.70 radiation 20.0 1440 < th dose dependent rect. 12 1
162 10.71 wind 1.0 43200 > th dose independent rect. 1 1
169 10.71 wind 1.0 43200 > th dose dependent rect. 6 3
176 10.71 wind 1.0 43200 > th dose dependent rect. 24 10
188 10.72 humidity 80.0 43200 < th dose independent rect. 23 20
208 10.73 humidity 70.0 43200 > th dose dependent sin 16 NA
280 10.75 humidity 70.0 43200 > th dose dependent rect. 20 23
290 10.76 wind 9.0 43200 < th dose dependent rect. 11 1
295 10.76 humidity 80.0 43200 > th dose dependent rect. 20 5
313 10.76 humidity 70.0 43200 > th dose dependent rect. 22 19
321 10.76 humidity 70.0 43200 > th dose dependent rect. 5 23
324 10.76 humidity 70.0 43200 > th dose dependent rect. 18 23
329 10.77 wind 3.0 43200 < th dose independent rect. 24 5
333 10.77 humidity 70.0 43200 > th dose dependent no NA NA
374 10.79 humidity 80.0 43200 < th dose independent sin 3 NA
379 10.79 wind 1.0 43200 > th dose dependent rect. 3 1
391 10.79 humidity 70.0 43200 > th dose dependent rect. 2 23
395 10.80 wind 9.0 43200 < th dose independent rect. 10 1
406 10.80 humidity 80.0 43200 > th dose dependent rect. 22 2
420 10.81 wind 1.0 43200 > th dose independent rect. 24 5
432 10.81 humidity 80.0 43200 > th dose dependent rect. 19 8
446 10.82 wind 1.0 43200 > th dose independent rect. 17 1
473 10.82 radiation 1.0 1440 < th dose dependent rect. 5 12
519 10.84 humidity 90.0 14400 > th dose dependent rect. 5 5
529 10.84 radiation 1.0 1440 < th dose dependent rect. 23 18
543 10.85 temperature 20.0 90 > th dose independent rect. 20 18
544 10.85 wind 3.0 43200 < th dose dependent rect. 17 1
574 10.86 precipitation 0.1 14400 > th dose dependent rect. 9 5
585 10.87 radiation 1.0 1440 < th dose independent rect. 9 3
594 10.87 radiation 1.0 1440 < th dose dependent rect. 9 3
604 10.88 humidity 90.0 14400 < th dose independent rect. 13 1
609 10.88 wind 1.0 43200 < th dose independent rect. 14 5
648 10.89 wind 1.0 43200 < th dose independent rect. 17 1
649 10.89 humidity 90.0 14400 > th dose independent rect. 6 1
659 10.89 temperature 20.0 270 > th dose independent rect. 17 21
682 10.90 wind 1.0 43200 > th dose independent rect. 14 5
686 10.90 humidity 80.0 43200 > th dose independent rect. 8 19
714 10.91 precipitation 0.1 14400 < th dose independent rect. 13 1
722 10.91 humidity 80.0 43200 > th dose independent rect. 11 15
726 10.91 humidity 80.0 43200 > th dose dependent sin 12 NA
728 10.91 precipitation 0.1 14400 > th dose dependent rect. 13 1
729 10.91 precipitation 0.1 14400 < th dose dependent rect. 13 1
748 10.92 wind 9.0 43200 > th dose independent rect. 10 1
749 10.92 precipitation 0.1 14400 > th dose independent rect. 13 1
767 10.92 humidity 80.0 43200 < th dose dependent rect. 2 6
794 10.93 humidity 70.0 14400 < th dose independent rect. 11 1
808 10.93 humidity 80.0 43200 > th dose independent rect. 10 17
811 10.93 humidity 80.0 43200 > th dose independent rect. 6 20
814 10.93 temperature 20.0 270 > th dose independent rect. 5 22
815 10.93 wind 1.0 43200 > th dose dependent sin 7 NA
816 10.93 humidity 70.0 43200 > th dose dependent sin 4 NA
819 10.93 humidity 90.0 14400 > th dose dependent rect. 6 2
822 10.93 wind 1.0 43200 < th dose dependent rect. 15 3
824 10.93 wind 1.0 43200 > th dose dependent rect. 24 4
832 10.93 radiation 1.0 1440 < th dose dependent rect. 7 10
838 10.94 humidity 70.0 14400 < th dose independent rect. 15 1
844 10.94 precipitation 0.1 14400 > th dose independent rect. 9 5
856 10.94 wind 5.0 43200 < th dose dependent sin 7 NA
867 10.94 radiation 1.0 1440 < th dose dependent rect. 9 7
891 10.95 humidity 70.0 14400 > th dose independent rect. 15 1
892 10.95 humidity 80.0 14400 > th dose independent rect. 18 1
893 10.95 humidity 90.0 14400 < th dose independent rect. 6 1
930 10.96 wind 1.0 43200 < th dose independent rect. 15 3
932 10.96 precipitation 0.1 14400 > th dose independent rect. 11 3
942 10.96 humidity 80.0 43200 < th dose independent rect. 8 18
982 10.97 humidity 80.0 43200 < th dose independent rect. 11 15
998 10.97 wind 1.0 43200 < th dose dependent rect. 13 6